RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ATF7IP2Q5U623 682 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 GET4Q7L5D6 327 aaPredicted RBP18.57■□□□□ 0.56
SMN2-216ENST00000638794 CEP57Q86XR8 500 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 IGSF22Q8N9C0 903 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 LNX1Q8TBB1 728 aaPredicted RBP18.57■□□□□ 0.56
SMN2-216ENST00000638794 SNX29Q8TEQ0 813 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 PIK3R5Q8WYR1 880 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 CLSTN3Q9BQT9 956 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 FBXW11Q9UKB1 542 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 FBXL21Q9UKT6 434 aa18.57■□□□□ 0.56
SMN2-216ENST00000638794 ZMYND10O75800 440 aa18.56■□□□□ 0.56
SMN2-216ENST00000638794 PDIA5Q14554 519 aa18.56■□□□□ 0.56
SMN2-216ENST00000638794 GLRA4Q5JXX5 417 aa18.56■□□□□ 0.56
SMN2-216ENST00000638794 SIX5Q8N196 739 aa18.56■□□□□ 0.56
SMN2-216ENST00000638794 PCDHB6Q9Y5E3 794 aa18.56■□□□□ 0.56
SMN2-216ENST00000638794 PP2D1A8MPX8 630 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 ADAM12O43184 909 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 PI15O43692 258 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 GFRA3O60609 400 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 CFHP08603 1231 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 AOC1P19801 751 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 IGFBP6P24592 240 aaPredicted RBP18.55■□□□□ 0.56
SMN2-216ENST00000638794 ELAVL2Q12926 359 aaKnown RBP18.55■□□□□ 0.56
SMN2-216ENST00000638794 PPP1R10Q96QC0 940 aaKnown RBP18.55■□□□□ 0.56
SMN2-216ENST00000638794 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
SMN2-216ENST00000638794 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMN2-216ENST00000638794 CCDC169A6NNP5 214 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 E9PMD0 336 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 K7ERI5 159 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 LAMP2P13473 410 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 NPTX2P47972 431 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 IL17AQ16552 155 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 LIN9Q5TKA1 542 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 SLC44A3Q8N4M1 653 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 STK24Q9Y6E0 443 aa18.54■□□□□ 0.56
SMN2-216ENST00000638794 PHLPP2Q6ZVD8 1323 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 TMEM189-UBE2V1I3L0A0 370 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 CITO14578 2027 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 ST18O60284 1047 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 HIP1RO75146 1068 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 C8AP07357 584 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 CDC25AP30304 524 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 CLCNKBP51801 687 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 PEX3P56589 373 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 KRT79Q5XKE5 535 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.53■□□□□ 0.56
SMN2-216ENST00000638794 APBB1IPQ7Z5R6 666 aaPredicted RBP18.53■□□□□ 0.56
SMN2-216ENST00000638794 DAW1Q8N136 415 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 CEP120Q8N960 986 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 NXPE3Q969Y0 559 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 RUSC1Q9BVN2 902 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 GOLGA2P5Q9HBQ8 144 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 WNT16Q9UBV4 365 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 DNM3Q9UQ16 869 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 TNFSF13BQ9Y275 285 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 MYH11P35749 1972 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 MYH15Q9Y2K3 1946 aa18.53■□□□□ 0.56
SMN2-216ENST00000638794 KRBA1A5PL33 1030 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 PROB1E7EW31 1015 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 LAD1O00515 517 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 B3GAT3O94766 335 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 HNRNPA1P09651 372 aaKnown RBP eCLIP18.52■□□□□ 0.56
SMN2-216ENST00000638794 SRFP11831 508 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 FGFR3P22607 806 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 FSHRP23945 695 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 DMP1Q13316 513 aaPredicted RBP18.52■□□□□ 0.56
SMN2-216ENST00000638794 HTR4Q13639 388 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 UPP1Q16831 310 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 PPM1LQ5SGD2 360 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 PDXDC1Q6P996 788 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 CD300LGQ6UXG3 332 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 TAS1R3Q7RTX0 852 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 GRASPQ7Z6J2 395 aaPredicted RBP18.52■□□□□ 0.56
SMN2-216ENST00000638794 C3orf58Q8NDZ4 430 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 ST13P5Q8NFI4 369 aaPredicted RBP18.52■□□□□ 0.56
SMN2-216ENST00000638794 ACO2Q99798 780 aaKnown RBP18.52■□□□□ 0.56
SMN2-216ENST00000638794 RTP3Q9BQQ7 232 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 MMTAG2Q9BU76 263 aaKnown RBP18.52■□□□□ 0.56
SMN2-216ENST00000638794 CDT1Q9H211 546 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 PTPRHQ9HD43 1115 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 ARHGAP28Q9P2N2 729 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
SMN2-216ENST00000638794 CA14Q9ULX7 337 aa18.52■□□□□ 0.56
SMN2-216ENST00000638794 RIF1Q5UIP0 2472 aaKnown RBP18.51■□□□□ 0.55
SMN2-216ENST00000638794 NOTCH4Q99466 2003 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 SMIM28A0A1B0GU29 152 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 ANHXE9PGG2 379 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 CCL16O15467 120 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 HOXA9P31269 272 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 OR1D2P34982 312 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 PRPHP41219 470 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 NBL1P41271 181 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 GRM5P41594 1212 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 OSTNP61366 133 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 NTHL1P78549 312 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 MAPK7Q13164 816 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 RAB33AQ14088 237 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 ZNF568Q3ZCX4 644 aa18.51■□□□□ 0.55
SMN2-216ENST00000638794 RINT1Q6NUQ1 792 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms