RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 MARCH8Q5T0T0 291 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 WDR49Q8IV35 697 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 TATDN2Q93075 761 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 AGPAT1Q99943 283 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 CPSF3Q9UKF6 684 aaKnown RBP13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 ABT1Q9ULW3 272 aaKnown RBP13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 TNFSF13BQ9Y275 285 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 MYH10P35580 1976 aa13.21□□□□□ -0.29
CACNA1D-228ENST00000638120 A0A087WZ62 844 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 A0A0A6YYK5 440 aaPredicted RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 AP3M2P53677 418 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 NAP1L1P55209 391 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 SLC20A1Q8WUM9 679 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 GOLGA1Q92805 767 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 FDXACB1Q9BRP7 624 aaPredicted RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 CDT1Q9H211 546 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 SNX12Q9UMY4 172 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 RRN3P2A6NIE6 340 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 CA12O43570 354 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 ZEB2O60315 1214 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 SGPL1O95470 568 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 VTNP04004 478 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 PRLRP16471 622 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 USP8P40818 1118 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 SURF1Q15526 300 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 AMHR2Q16671 573 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 DNAAF5Q86Y56 855 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 OR5B17Q8NGF7 314 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 NOCTQ9UK39 431 aaKnown RBP13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 Q9Y3F1 56 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 NCANO14594 1321 aa13.2□□□□□ -0.3
CACNA1D-228ENST00000638120 KAT6AQ92794 2004 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 GRID2IPA4D2P6 1211 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 CYP26A1O43174 497 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 PALMO75781 387 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 TMEM253P0C7T8 217 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 CTGFP29279 349 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 GALCP54803 685 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 IFI16Q16666 785 aaKnown RBP13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 SMC1BQ8NDV3 1235 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 LMBR1Q8WVP7 490 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 KAT2BQ92831 832 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 ANK1P16157 1881 aa13.19□□□□□ -0.3
CACNA1D-228ENST00000638120 CTAGE15A4D2H0 777 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 SRGAP2O75044 1071 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CTAGE8P0CG41 777 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CPT1AP50416 773 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 PDE6CP51160 858 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CTAGE6Q86UF2 777 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 ZNF410Q86VK4 478 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CTAGE4Q8IX94 777 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 THNSL1Q8IYQ7 743 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 RPUSD2Q8IZ73 545 aaKnown RBP13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 KIAA0319LQ8IZA0 1049 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 RABGGTAQ92696 567 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 NRCAMQ92823 1304 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 TLR10Q9BXR5 811 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 GPBP1L1Q9HC44 474 aaPredicted RBP13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 TAS2R14Q9NYV8 317 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 ANKRD62A6NC57 917 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 TMEM88BA6NKF7 163 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 KIF3CO14782 793 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 MCF2P10911 925 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CYP11B1P15538 503 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 CHRNB2P17787 502 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 TUBB4BP68371 445 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 NOP14P78316 857 aaKnown RBP13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 NCOA4Q13772 614 aa13.18□□□□□ -0.3
CACNA1D-228ENST00000638120 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms