RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ADAT2Q7Z6V5 191 aaKnown RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 DDX42Q86XP3 938 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLN6-224ENST00000638076 MREGQ8N565 214 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 UBL4BQ8N7F7 174 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 ZNF564Q8TBZ8 553 aaPredicted RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 KRT35Q92764 455 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 NAP1L3Q99457 506 aaPredicted RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 MSTO1Q9BUK6 570 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 RBAKQ9NYW8 714 aaPredicted RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 BHMG1C9JSJ3 638 aaPredicted RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 GRIN3BO60391 1043 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 HLA-DRAP01903 254 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 CYP1A2P05177 515 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 PGK2P07205 417 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 BIRC3Q13489 604 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 CAPSQ13938 189 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 ZBTB41Q5SVQ8 909 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 ANKRD13AQ8IZ07 590 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 EIF1ADQ8N9N8 165 aaKnown RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.1■■□□□ 1.292e-7■■■■■ 68.1
CLN6-224ENST00000638076 FAM81BQ96LP2 452 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 RPS6KC1Q96S38 1066 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 GTF3C4Q9UKN8 822 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 TRPC6Q9Y210 931 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 PTPRJQ12913 1337 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 TTI1O43156 1089 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 OPA1O60313 960 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 PIK3CAP42336 1068 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 DRP2Q13474 957 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 CELF4Q9BZC1 486 aaKnown RBP23.09■■□□□ 1.29
CLN6-224ENST00000638076 TMEM134Q9H6X4 195 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 TXNRD2Q9NNW7 524 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 CXCL11O14625 94 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 MAFO75444 373 aaPredicted RBP23.09■■□□□ 1.29
CLN6-224ENST00000638076 ARIH2O95376 493 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 LDHAP00338 332 aaKnown RBP23.09■■□□□ 1.29
CLN6-224ENST00000638076 CAPN2P17655 700 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 MARCKSL1P49006 195 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 ACAD10Q6JQN1 1059 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 AADACL2Q6P093 401 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 BTBD6Q96KE9 485 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 ZSWIM1Q9BR11 485 aa23.09■■□□□ 1.29
CLN6-224ENST00000638076 A0A0B4J269 797 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 GOLGA6CA6NDK9 693 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 GOLGA6DP0CG33 693 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 TTLL12Q14166 644 aaPredicted RBP23.08■■□□□ 1.29
CLN6-224ENST00000638076 SPOPLQ6IQ16 392 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 IQCKQ8N0W5 287 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 AZI2Q9H6S1 392 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 GOLGA6AQ9NYA3 693 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 AGTPBP1Q9UPW5 1226 aa23.08■■□□□ 1.29
CLN6-224ENST00000638076 SPDYE5A6NIY4 337 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 GOLGA8KD6RF30 607 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 ADCY3O60266 1144 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 CLSTN1O94985 981 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 SLC25A27O95847 323 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 POU5F1Q01860 360 aaKnown RBP23.08■■□□□ 1.28
CLN6-224ENST00000638076 CLEC16AQ2KHT3 1053 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 CFAP58Q5T655 872 aa23.08■■□□□ 1.28
CLN6-224ENST00000638076 FHDC1Q9C0D6 1143 aaPredicted RBP23.08■■□□□ 1.28
CLN6-224ENST00000638076 GOLGA6L10A0A0M3HER8 536 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 VNN1O95497 513 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 MARK3P27448 753 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 PTENP60484 403 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 Q3C1V9 767 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 MORC4Q8TE76 937 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 PRPF31Q8WWY3 499 aaKnown RBP23.07■■□□□ 1.28
CLN6-224ENST00000638076 GLG1Q92896 1179 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 ERVK-5Q9HDB9 667 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 UVRAGQ9P2Y5 699 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 SIP14410 1827 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 ADGRA2Q96PE1 1338 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 CCDC66A2RUB6 948 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 HARSP12081 509 aaKnown RBP23.07■■□□□ 1.28
CLN6-224ENST00000638076 COPB2P35606 906 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 PPFIA1Q13136 1202 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 CLUL1Q15846 466 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 SEZ6Q53EL9 994 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 FAM76AQ8TAV0 307 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 PIK3R5Q8WYR1 880 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 CDCA5Q96FF9 252 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 FGD4Q96M96 766 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 MPHOSPH6Q99547 160 aaKnown RBP23.07■■□□□ 1.28
CLN6-224ENST00000638076 WNT8AQ9H1J5 351 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 NEUROG2Q9H2A3 272 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 RBPJLQ9UBG7 517 aa23.07■■□□□ 1.28
CLN6-224ENST00000638076 UTP11Q9Y3A2 253 aaKnown RBP23.07■■□□□ 1.28
CLN6-224ENST00000638076 SOCS7O14512 581 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 DAPK3O43293 454 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 NF2P35240 595 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 PEX5P50542 639 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 HSDL1Q3SXM5 330 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 CD101Q93033 1021 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 CNOT8Q9UFF9 292 aaKnown RBP23.06■■□□□ 1.28
CLN6-224ENST00000638076 KCNH4Q9UQ05 1017 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 PCDHB2Q9Y5E7 798 aa23.06■■□□□ 1.28
CLN6-224ENST00000638076 SPOPO43791 374 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 HSPA9P38646 679 aaKnown RBP23.05■■□□□ 1.28
CLN6-224ENST00000638076 TRIM50Q86XT4 487 aa23.05■■□□□ 1.28
CLN6-224ENST00000638076 CPNE8Q86YQ8 564 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms