RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.44	□□□□□ -0.74
CACNA1A-256	ENST00000637981	COL4A3BP	Q9Y5P4	624 aa		10.44	□□□□□ -0.74
CACNA1A-256	ENST00000637981	GAS2	O43903	313 aa	Known RBP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	MED24	O75448	989 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SPATA31D3	P0C874	917 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SP9	P0CG40	484 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SRGAP2C	P0DJJ0	459 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SPATA31C1	P0DKV0	1188 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	HOXA11	P31270	313 aa	Predicted RBP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RFC5	P40937	340 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ZRSR1	Q15695	479 aa	Known RBP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	XKR9	Q5GH70	373 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	UBXN11	Q5T124	520 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	KIAA0319	Q5VV43	1072 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PHLDB3	Q6NSJ2	640 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SPATA31D4	Q6ZUB0	917 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	GET4	Q7L5D6	327 aa	Predicted RBP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SRGAP1	Q7Z6B7	1085 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	C1orf210	Q8IVY1	113 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	COLGALT2	Q8IYK4	626 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RNF168	Q8IYW5	571 aa	Predicted RBP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SLC7A3	Q8WY07	619 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CCDC34	Q96HJ3	373 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CEP170P1	Q96L14	293 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CLIC6	Q96NY7	704 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	MINDY3	Q9H8M7	445 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RXFP1	Q9HBX9	757 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	UBN1	Q9NPG3	1134 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ARHGEF3	Q9NR81	526 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DLGAP2	Q9P1A6	1054 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981	STK17A	Q9UEE5	414 aa		10.43	□□□□□ -0.74
CACNA1A-256	ENST00000637981		A0A1W2PQ27	194 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981		A0A1W2PQ64	194 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981		A0A1W2PQD8	194 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ARHGEF35	A5YM69	484 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	LAMP2	P13473	410 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ITGA4	P13612	1032 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CMA1	P23946	247 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CDC25A	P30304	524 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	NPEPPS	P55786	919 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DSG1	Q02413	1049 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RRAGB	Q5VZM2	374 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DCLRE1A	Q6PJP8	1040 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CLEC17A	Q6ZS10	378 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PALB2	Q86YC2	1186 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	GLYCTK	Q8IVS8	523 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DCLK2	Q8N568	766 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	SMG8	Q8ND04	991 aa	Known RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CNNM3	Q8NE01	707 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PJA1	Q8NG27	643 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	HDAC7	Q8WUI4	952 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PRPF31	Q8WWY3	499 aa	Known RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PSPC1	Q8WXF1	523 aa	Known RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RUBCN	Q92622	972 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	TMEM143	Q96AN5	459 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ZNF707	Q96C28	371 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	MMTAG2	Q9BU76	263 aa	Known RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	LRRC27	Q9C0I9	530 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	CUEDC2	Q9H467	287 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PLEKHA4	Q9H4M7	779 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DDX19A	Q9NUU7	478 aa	Known RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ZDHHC7	Q9NXF8	308 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	KCND2	Q9NZV8	630 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	NUMBL	Q9Y6R0	609 aa		10.42	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DNAH14	Q0VDD8	3507 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	GVINP1	Q7Z2Y8	2422 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ARL5C	A6NH57	179 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PP2D1	A8MPX8	630 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ANHX	E9PGG2	379 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981		F8W810	466 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	TGM5	O43548	720 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	NR1I2	O75469	434 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DGAT1	O75907	488 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	ERLIN2	O94905	339 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PAPLN	O95428	1278 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	EFEMP2	O95967	443 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	MLH1	P40692	756 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	STAT6	P42226	847 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	GRIN1	Q05586	938 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DSC1	Q08554	894 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	LAMTOR4	Q0VGL1	99 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	HTR4	Q13639	388 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RESP18	Q5W5W9	173 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	POTEG	Q6S5H5	508 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	IQUB	Q8NA54	791 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	RNF149	Q8NC42	400 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	MCPH1	Q8NEM0	835 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PIGO	Q8TEQ8	1089 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	TCP11	Q8WWU5	503 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	EPSTI1	Q96J88	318 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	GAD1	Q99259	594 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	EIF2A	Q9BY44	585 aa	Known RBP	10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	PRKD2	Q9BZL6	878 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	FOXQ1	Q9C009	403 aa		10.41	□□□□□ -0.74
CACNA1A-256	ENST00000637981	DHX33	Q9H6R0	707 aa	Known RBP	10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms