RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 REEP2Q9BRK0 252 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 ZSCAN16Q9H4T2 348 aaPredicted RBP18.6■□□□□ 0.57
CTSD-214ENST00000637937 RXFP1Q9HBX9 757 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 C11orf16Q9NQ32 467 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 BLOC1S4Q9NUP1 217 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 ANKFY1Q9P2R3 1169 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 ODF2LQ9ULJ1 636 aa18.6■□□□□ 0.57
CTSD-214ENST00000637937 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
CTSD-214ENST00000637937 MYBP10242 640 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 MATR3P43243 847 aaKnown RBP eCLIP18.59■□□□□ 0.57
CTSD-214ENST00000637937 NAB2Q15742 525 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 HERC4Q5GLZ8 1057 aaPredicted RBP18.59■□□□□ 0.57
CTSD-214ENST00000637937 FAM171A1Q5VUB5 890 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 ELMSAN1Q6PJG2 1045 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 CEP57Q86XR8 500 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 HSCBQ8IWL3 235 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 LARP4BQ92615 738 aaKnown RBP18.59■□□□□ 0.57
CTSD-214ENST00000637937 SNX21Q969T3 373 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 BICD1Q96G01 975 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 ZBTB45Q96K62 511 aaPredicted RBP18.59■□□□□ 0.57
CTSD-214ENST00000637937 ACAP3Q96P50 834 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 CCSER1Q9C0I3 900 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 POMKQ9H5K3 350 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 SFXN1Q9H9B4 322 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.59■□□□□ 0.573e-8■□□□□ 10.9
CTSD-214ENST00000637937 FBXO2Q9UK22 296 aaPredicted RBP18.59■□□□□ 0.57
CTSD-214ENST00000637937 NR2E1Q9Y466 385 aa18.59■□□□□ 0.57
CTSD-214ENST00000637937 SMIM28A0A1B0GU29 152 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 TBCAO75347 108 aaKnown RBP18.58■□□□□ 0.56
CTSD-214ENST00000637937 TOM1L1O75674 476 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 GLUD1P00367 558 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 HSP90AA1P07900 732 aaKnown RBP18.58■□□□□ 0.56
CTSD-214ENST00000637937 PROZP22891 400 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 DDIT3P35638 169 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 TXLNAP40222 546 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 USP49Q70CQ1 688 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 HAUS6Q7Z4H7 955 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 PALB2Q86YC2 1186 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 GLYCTKQ8IVS8 523 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 CLIC6Q96NY7 704 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 PPP1R10Q96QC0 940 aaKnown RBP18.58■□□□□ 0.56
CTSD-214ENST00000637937 USP28Q96RU2 1077 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 TTPALQ9BTX7 342 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 PARVGQ9HBI0 331 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 MAN1C1Q9NR34 630 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 DPP7Q9UHL4 492 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 RAPGEFL1Q9UHV5 662 aa18.58■□□□□ 0.56
CTSD-214ENST00000637937 CLDN3O15551 220 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 B3GAT3O94766 335 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 SPATA31D3P0C874 917 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 RPL17P18621 184 aaKnown RBP18.57■□□□□ 0.56
CTSD-214ENST00000637937 CLCNKBP51801 687 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 NCKAP1LP55160 1127 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 CREMQ03060 361 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 NOLC1Q14978 699 aaKnown RBP eCLIP18.57■□□□□ 0.561e-8■□□□□ 8.1
CTSD-214ENST00000637937 RTP2Q5QGT7 225 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 ZPBP2Q6X784 338 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 SPATA31D4Q6ZUB0 917 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 UROC1Q96N76 676 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 GOLGA2P5Q9HBQ8 144 aa18.57■□□□□ 0.56
CTSD-214ENST00000637937 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
CTSD-214ENST00000637937 PRR33A8MZF0 331 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 K7ENM7 598 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 ABLIM1O14639 778 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 TRAK2O60296 914 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 BRD1O95696 1058 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 ELAVL2Q12926 359 aaKnown RBP18.56■□□□□ 0.56
CTSD-214ENST00000637937 SEZ6Q53EL9 994 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 RRAGBQ5VZM2 374 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 DCLRE1AQ6PJP8 1040 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 PRSS55Q6UWB4 352 aaPredicted RBP18.56■□□□□ 0.56
CTSD-214ENST00000637937 ALKAL1Q6UXT8 129 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 GPR149Q86SP6 731 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 GPR65Q8IYL9 337 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 KRI1Q8N9T8 703 aaKnown RBP18.56■□□□□ 0.56
CTSD-214ENST00000637937 SNX27Q96L92 541 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 SLC38A7Q9NVC3 462 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 FNIP2Q9P278 1114 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 TBX20Q9UMR3 447 aa18.56■□□□□ 0.56
CTSD-214ENST00000637937 LIG4P49917 911 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 ZNF131P52739 623 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 SLC39A14Q15043 492 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 UPP1Q16831 310 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 XKR4Q5GH76 650 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
CTSD-214ENST00000637937 FEZF2Q8TBJ5 459 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
CTSD-214ENST00000637937 EDAQ92838 391 aa18.55■□□□□ 0.56
CTSD-214ENST00000637937 CCDC195A0A1B0GUA6 201 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 C2CD4DB7Z1M9 353 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 HNRNPDLO14979 420 aaKnown RBP18.54■□□□□ 0.56
CTSD-214ENST00000637937 TGM5O43548 720 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 TRAPPC3O43617 180 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 SCP2P22307 547 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 SOX4Q06945 474 aaPredicted RBP18.54■□□□□ 0.56
CTSD-214ENST00000637937 MCL1Q07820 350 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 STK38Q15208 465 aa18.54■□□□□ 0.56
CTSD-214ENST00000637937 PSMD5Q16401 504 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms