RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 PAPLNO95428 1278 aa22.07■■□□□ 1.12
CLN6-222ENST00000637667 ELAVL2Q12926 359 aaKnown RBP22.07■■□□□ 1.12
CLN6-222ENST00000637667 MAPK7Q13164 816 aa22.07■■□□□ 1.12
CLN6-222ENST00000637667 PIK3R5Q8WYR1 880 aa22.07■■□□□ 1.12
CLN6-222ENST00000637667 PPP1R10Q96QC0 940 aaKnown RBP22.07■■□□□ 1.12
CLN6-222ENST00000637667 ACO2Q99798 780 aaKnown RBP22.07■■□□□ 1.12
CLN6-222ENST00000637667 MRPL4Q9BYD3 311 aaKnown RBP22.07■■□□□ 1.12
CLN6-222ENST00000637667 ZDHHC7Q9NXF8 308 aa22.07■■□□□ 1.12
CLN6-222ENST00000637667 RBM19Q9Y4C8 960 aaKnown RBP22.07■■□□□ 1.12
CLN6-222ENST00000637667 DENND4AQ7Z401 1863 aa22.07■■□□□ 1.12
CLN6-222ENST00000637667 CLUHO75153 1309 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 MCM2P49736 904 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 PTPN5P54829 565 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 GLRA4Q5JXX5 417 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 HYIQ5T013 277 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 TAS1R3Q7RTX0 852 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 CEP57Q86XR8 500 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 STAMQ92783 540 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 TIPINQ9BVW5 301 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 NT5C3AQ9H0P0 336 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 CDT1Q9H211 546 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 C17orf75Q9HAS0 396 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 KMT5AQ9NQR1 393 aa22.06■■□□□ 1.12
CLN6-222ENST00000637667 PLXNA3P51805 1871 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 N4BP1O75113 896 aaKnown RBP22.05■■□□□ 1.12
CLN6-222ENST00000637667 GUCY2CP25092 1073 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 GRM5P41594 1212 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 PSMD5Q16401 504 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 ZNF568Q3ZCX4 644 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 CEP120Q8N960 986 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 LNX1Q8TBB1 728 aaPredicted RBP22.05■■□□□ 1.12
CLN6-222ENST00000637667 PNMA5Q96PV4 448 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 CLSTN3Q9BQT9 956 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 CCDC94Q9BW85 323 aaPredicted RBP22.05■■□□□ 1.12
CLN6-222ENST00000637667 TARS2Q9BW92 718 aaKnown RBP22.05■■□□□ 1.12
CLN6-222ENST00000637667 PRKD2Q9BZL6 878 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 PIDD1Q9HB75 910 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 PTPRHQ9HD43 1115 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 SMC3Q9UQE7 1217 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 C2orf16Q68DN1 1984 aa22.05■■□□□ 1.12
CLN6-222ENST00000637667 VWA3AA6NCI4 1184 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 SFI1A8K8P3 1242 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 TMEM189-UBE2V1I3L0A0 370 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 ZMYND10O75800 440 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 B3GAT3O94766 335 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 GBP2P32456 591 aaPredicted RBP22.04■■□□□ 1.12
CLN6-222ENST00000637667 YARSP54577 528 aaKnown RBP22.04■■□□□ 1.12
CLN6-222ENST00000637667 TCF15Q12870 199 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 TDGQ13569 410 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 ARL6IP4Q66PJ3 421 aaKnown RBP22.04■■□□□ 1.12
CLN6-222ENST00000637667 PDXDC1Q6P996 788 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.04■■□□□ 1.12
CLN6-222ENST00000637667 KCTD17Q8N5Z5 321 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 KCNK12Q9HB15 430 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 TOPORSQ9NS56 1045 aaPredicted RBP22.04■■□□□ 1.12
CLN6-222ENST00000637667 FBXW11Q9UKB1 542 aa22.04■■□□□ 1.12
CLN6-222ENST00000637667 SMIM28A0A1B0GU29 152 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 SLC16A4O15374 487 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 MRE11P49959 708 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 XKR4Q5GH76 650 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 DCLRE1AQ6PJP8 1040 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 SPIRE2Q8WWL2 714 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 UROC1Q96N76 676 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 TBC1D32Q96NH3 1257 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 MYADMQ96S97 322 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 PLIN2Q99541 437 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 NTPCRQ9BSD7 190 aaKnown RBP22.03■■□□□ 1.12
CLN6-222ENST00000637667 IGSF9Q9P2J2 1179 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 EPS15L1Q9UBC2 864 aa22.03■■□□□ 1.12
CLN6-222ENST00000637667 MCF2P10911 925 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 FGFR3P22607 806 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 PROZP22891 400 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 IGFBP6P24592 240 aaPredicted RBP22.02■■□□□ 1.12
CLN6-222ENST00000637667 CLCNKBP51801 687 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 OSTNP61366 133 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 RAD51AP2Q09MP3 1159 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 ALKAL1Q6UXT8 129 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 SYT2Q8N9I0 419 aaPredicted RBP22.02■■□□□ 1.12
CLN6-222ENST00000637667 CDK5RAP3Q96JB5 506 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 TCHPQ9BT92 498 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 GOLGA2P5Q9HBQ8 144 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 DUSP12Q9UNI6 340 aa22.02■■□□□ 1.12
CLN6-222ENST00000637667 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.02■■□□□ 1.12
CLN6-222ENST00000637667 KMT2EQ8IZD2 1858 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 ABLIM1O14639 778 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 ADAM12O43184 909 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 PLA2G4BP0C869 781 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 PLS3P13797 630 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 NUBP1P53384 320 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 SLC12A3P55017 1021 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 UPP1Q16831 310 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 TMEM119Q4V9L6 283 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 LIN9Q5TKA1 542 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 LARP1BQ659C4 914 aaKnown RBP22.01■■□□□ 1.11
CLN6-222ENST00000637667 MPZL3Q6UWV2 235 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 CD300LGQ6UXG3 332 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 TMEM161BQ8NDZ6 487 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 SNX27Q96L92 541 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 MFSD1Q9H3U5 465 aa22.01■■□□□ 1.11
CLN6-222ENST00000637667 SLC38A7Q9NVC3 462 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms