RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 IRAK1P51617 712 aa13□□□□□ -0.33
CLN8-212ENST00000637083 ALDH5A1P51649 535 aaPredicted RBP13□□□□□ -0.33
CLN8-212ENST00000637083 AP3M2P53677 418 aa13□□□□□ -0.33
CLN8-212ENST00000637083 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
CLN8-212ENST00000637083 RWDD2BP57060 319 aa13□□□□□ -0.33
CLN8-212ENST00000637083 BIRC3Q13489 604 aa13□□□□□ -0.33
CLN8-212ENST00000637083 PRKG1Q13976 671 aa13□□□□□ -0.33
CLN8-212ENST00000637083 CLEC16AQ2KHT3 1053 aa13□□□□□ -0.33
CLN8-212ENST00000637083 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
CLN8-212ENST00000637083 LBX2Q6XYB7 198 aa13□□□□□ -0.33
CLN8-212ENST00000637083 KDM7AQ6ZMT4 941 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TRIM72Q6ZMU5 477 aa13□□□□□ -0.33
CLN8-212ENST00000637083 PIK3R5Q8WYR1 880 aa13□□□□□ -0.33
CLN8-212ENST00000637083 CEP89Q96ST8 783 aa13□□□□□ -0.33
CLN8-212ENST00000637083 FAM129AQ9BZQ8 928 aa13□□□□□ -0.33
CLN8-212ENST00000637083 AVENQ9NQS1 362 aaPredicted RBP13□□□□□ -0.33
CLN8-212ENST00000637083 CSADQ9Y600 493 aa13□□□□□ -0.33
CLN8-212ENST00000637083 IGKV6D-21A0A0A0MT36 114 aa13□□□□□ -0.33
CLN8-212ENST00000637083 KRT14P02533 472 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
CLN8-212ENST00000637083 ARL2P36404 184 aa13□□□□□ -0.33
CLN8-212ENST00000637083 SLC1A1P43005 524 aa13□□□□□ -0.33
CLN8-212ENST00000637083 PEX5P50542 639 aa13□□□□□ -0.33
CLN8-212ENST00000637083 SOX10P56693 466 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TRADDQ15628 312 aa13□□□□□ -0.33
CLN8-212ENST00000637083 ZACNQ401N2 412 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TAS1R3Q7RTX0 852 aa13□□□□□ -0.33
CLN8-212ENST00000637083 CROCCP2Q86T23 111 aa13□□□□□ -0.33
CLN8-212ENST00000637083 UBLCP1Q8WVY7 318 aaPredicted RBP13□□□□□ -0.33
CLN8-212ENST00000637083 ALG3Q92685 438 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TATDN2Q93075 761 aa13□□□□□ -0.33
CLN8-212ENST00000637083 FAM167AQ96KS9 214 aa13□□□□□ -0.33
CLN8-212ENST00000637083 FMO2Q99518 471 aa13□□□□□ -0.33
CLN8-212ENST00000637083 FAM107BQ9H098 131 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TMBIM4Q9HC24 238 aa13□□□□□ -0.33
CLN8-212ENST00000637083 TOPORSQ9NS56 1045 aaPredicted RBP13□□□□□ -0.33
CLN8-212ENST00000637083 CNOT8Q9UFF9 292 aaKnown RBP13□□□□□ -0.33
CLN8-212ENST00000637083 PCYOX1Q9UHG3 505 aa13□□□□□ -0.33
CLN8-212ENST00000637083 LRRIQ4A6NIV6 560 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 COPB2P35606 906 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 PIK3CAP42336 1068 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 GNGT1P63211 74 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 ZNF211Q13398 564 aaPredicted RBP12.99□□□□□ -0.33
CLN8-212ENST00000637083 NAA35Q5VZE5 725 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 DUPD1Q68J44 220 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 KCNV1Q6PIU1 500 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 DLK2Q6UY11 383 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 SEPT14Q6ZU15 432 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 DDX1Q92499 740 aaKnown RBP12.99□□□□□ -0.33
CLN8-212ENST00000637083 CD101Q93033 1021 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLN8-212ENST00000637083 TELO2Q9Y4R8 837 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 KIAA1217Q5T5P2 1943 aa12.99□□□□□ -0.33
CLN8-212ENST00000637083 EIF3HO15372 352 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLN8-212ENST00000637083 GAS2O43903 313 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 GLRA2P23416 452 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 MAPK4P31152 587 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 EFNA5P52803 228 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 LIN9Q5TKA1 542 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 TMC3Q7Z5M5 1100 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLN8-212ENST00000637083 JAMLQ86YT9 394 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 MAGOHBQ96A72 148 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 MSTO1Q9BUK6 570 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 CELF4Q9BZC1 486 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 TSPYL1Q9H0U9 437 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.98□□□□□ -0.33
CLN8-212ENST00000637083 RBAKQ9NYW8 714 aaPredicted RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 MTRF1LQ9UGC7 380 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 SRRM3A6NNA2 597 aaPredicted RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 NR1D1P20393 614 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 MAN1A1P33908 653 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 FNTAP49354 379 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 STAT5BP51692 787 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 CDR1P51861 262 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 SP2Q02086 613 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 SURF1Q15526 300 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 CYP1B1Q16678 543 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 AGBL2Q5U5Z8 902 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 SLC13A5Q86YT5 568 aaPredicted RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 PROCA1Q8NCQ7 364 aaPredicted RBP12.98□□□□□ -0.33
CLN8-212ENST00000637083 TCP11Q8WWU5 503 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 SEPT1Q8WYJ6 367 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 TMEM143Q96AN5 459 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 VCPIP1Q96JH7 1222 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 CGRRF1Q99675 332 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 IMPG2Q9BZV3 1241 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 AZI2Q9H6S1 392 aa12.98□□□□□ -0.33
CLN8-212ENST00000637083 WDR81Q562E7 1941 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 PPFIA2O75334 1257 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 SLC25A27O95847 323 aa12.97□□□□□ -0.33
CLN8-212ENST00000637083 UNGP13051 313 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms