RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NSUN3Q9H649 340 aaKnown RBP8.96□□□□□ -0.98
PNKP-226ENST00000636840 SLC39A2Q9NP94 309 aa8.96□□□□□ -0.98
PNKP-226ENST00000636840 TLR9Q9NR96 1032 aa8.96□□□□□ -0.98
PNKP-226ENST00000636840 MIOSQ9NXC5 875 aa8.96□□□□□ -0.98
PNKP-226ENST00000636840 R3HCC1Q9Y3T6 440 aaKnown RBP8.96□□□□□ -0.98
PNKP-226ENST00000636840 STYXL1Q9Y6J8 313 aa8.96□□□□□ -0.98
PNKP-226ENST00000636840 UBE4BO95155 1302 aa8.96□□□□□ -0.98
PNKP-226ENST00000636840 PTPRSQ13332 1948 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 COL4A6Q14031 1691 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 SMIM28A0A1B0GU29 152 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 EPOPA6NHQ4 379 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 ZNF233A6NK53 670 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 ANKRD63C9JTQ0 380 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 PPP1R37O75864 691 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 IL18RAPO95256 599 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 CXCL14O95715 111 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 LINC00271P0C7V0 271 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 KCNE1P15382 129 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 CASP1P29466 404 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 RPL9P32969 192 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 DSC1Q08554 894 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 ELAVL2Q12926 359 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 KCNB1Q14721 858 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 SURF1Q15526 300 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 KNOP1Q1ED39 458 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 KMT5BQ4FZB7 885 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 DCLRE1AQ6PJP8 1040 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 ALKAL1Q6UXT8 129 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 SPRED2Q7Z698 418 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 DDX53Q86TM3 631 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 CEP120Q8N960 986 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 BEST2Q8NFU1 509 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 NOC3LQ8WTT2 800 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 CACTINQ8WUQ7 758 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 SMARCE1Q969G3 411 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 KIF12Q96FN5 646 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 GSDMAQ96QA5 445 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 GOLPH3LQ9H4A5 285 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 ASB7Q9H672 318 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 ENTPD7Q9NQZ7 604 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 DNAJB4Q9UDY4 337 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 UBQLN1Q9UMX0 589 aaKnown RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 COG5Q9UP83 839 aa8.95□□□□□ -0.98
PNKP-226ENST00000636840 PRG3Q9Y2Y8 225 aaPredicted RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 FNDC1Q4ZHG4 1894 aaPredicted RBP8.95□□□□□ -0.98
PNKP-226ENST00000636840 ABLIM1O14639 778 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 CALUO43852 315 aaPredicted RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 KLRC4O43908 158 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 RHOBTB3O94955 611 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 SRGAP2BP0DMP2 458 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PAX3P23760 479 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PBX3P40426 434 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PPP1R2P41236 205 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 ACOT2P49753 483 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 AFF1P51825 1210 aaKnown RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 DPYDQ12882 1025 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 STIM1Q13586 685 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 SMC1AQ14683 1233 aaKnown RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 AAK1Q2M2I8 961 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 SLC10A6Q3KNW5 377 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 USP41Q3LFD5 358 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 SEZ6Q53EL9 994 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 XKR4Q5GH76 650 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PDXDC1Q6P996 788 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 CLEC17AQ6ZS10 378 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 EP400NLQ6ZTU2 488 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 NT5DC4Q86YG4 428 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 NELFCDQ8IXH7 590 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 GSTCDQ8NEC7 633 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 ENGASEQ8NFI3 743 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 SNX27Q96L92 541 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PPP1R10Q96QC0 940 aaKnown RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 CDCA3Q99618 268 aaPredicted RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 TCF25Q9BQ70 676 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 FAM213AQ9BRX8 229 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 EMILIN2Q9BXX0 1053 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PCIF1Q9H4Z3 704 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 TLE6Q9H808 572 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 MRPL17Q9NRX2 175 aaKnown RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 CNTN3Q9P232 1028 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 HCSTQ9UBK5 93 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 DPP7Q9UHL4 492 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 CPSF3Q9UKF6 684 aaKnown RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 ADAM28Q9UKQ2 775 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 DERAQ9Y315 318 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 NUB1Q9Y5A7 615 aa8.94□□□□□ -0.98
PNKP-226ENST00000636840 PRRC2BQ5JSZ5 2229 aaKnown RBP8.94□□□□□ -0.98
PNKP-226ENST00000636840 MYO7AQ13402 2215 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 TTC26A0AVF1 554 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 ARHGEF37A1IGU5 675 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 CASTOR2A6NHX0 329 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 LACTBL1A8MY62 500 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 PDXKO00764 312 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 PTGESO14684 152 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 EXTL3O43909 919 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 GADD45BO75293 160 aaPredicted RBP8.93□□□□□ -0.98
PNKP-226ENST00000636840 B3GAT3O94766 335 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 SLC34A2O95436 690 aa8.93□□□□□ -0.98
PNKP-226ENST00000636840 SOD2P04179 222 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms