RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 KCNH2Q12809 1159 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 BFSP1Q12934 665 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 MYBPC2Q14324 1141 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 FRMD5Q7Z6J6 570 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 BRSK2Q8IWQ3 736 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 TMEM174Q8WUU8 243 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 CRACR2AQ9BSW2 395 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 TRIM6Q9C030 488 aaPredicted RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 MAGEC2Q9UBF1 373 aaPredicted RBP11.58□□□□□ -0.56
CLN5-213ENST00000636681 PARP2Q9UGN5 583 aa11.58□□□□□ -0.56
CLN5-213ENST00000636681 A0A1B0GTH6 734 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 C9IYK1 514 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 ZSCAN20P17040 1043 aaPredicted RBP11.57□□□□□ -0.56
CLN5-213ENST00000636681 UBASH3AP57075 661 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 NCBP1Q09161 790 aaKnown RBP11.57□□□□□ -0.56
CLN5-213ENST00000636681 UVSSAQ2YD98 709 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 DCAF4L1Q3SXM0 396 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 VWA3BQ502W6 1294 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 JADE1Q6IE81 842 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 MFSD5Q6N075 450 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 USP38Q8NB14 1042 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 DPF3Q92784 378 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 MKNK1Q9BUB5 465 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 TRIM5Q9C035 493 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 RGS18Q9NS28 235 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 SQORQ9Y6N5 450 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 GBF1Q92538 1859 aa11.57□□□□□ -0.56
CLN5-213ENST00000636681 TTC26A0AVF1 554 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 LRRC10BA6NIK2 292 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 ADCY5O95622 1261 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 FGFR1OPO95684 399 aaKnown RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 CLTAP09496 248 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 FGFR1P11362 822 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 ZNF75DP51815 510 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 TPM4P67936 248 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 NR1I3Q14994 352 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 PSMD6Q15008 389 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 PCBP1Q15365 356 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLN5-213ENST00000636681 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 ECHDC2Q86YB7 292 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 FAM114A1Q8IWE2 563 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 RABGGTAQ92696 567 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 C18orf25Q96B23 403 aaPredicted RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 ACAP3Q96P50 834 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 TMEM117Q9H0C3 514 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 NDST4Q9H3R1 872 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 RPF1Q9H9Y2 349 aaKnown RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 GOLGA2P5Q9HBQ8 144 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 CHST12Q9NRB3 414 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 HCSTQ9UBK5 93 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLN5-213ENST00000636681 COL4A6Q14031 1691 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 PDE4DIPQ5VU43 2346 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 A0A0U1RQF3 1178 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 PTGESO14684 152 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 EVI5O60447 810 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 B4GALT3O60512 393 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 LDHAP00338 332 aaKnown RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 MRE11P49959 708 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 DEFB103AP81534 67 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 GOLGA8FQ08AF8 430 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 GOLGA8DPQ0D2H9 430 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 KCNMA1Q12791 1236 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 OTOP2Q7RTS6 562 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 ZNF598Q86UK7 904 aaKnown RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 GSTCDQ8NEC7 633 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 SEPT8Q92599 483 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 SEMA4DQ92854 862 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 SNX27Q96L92 541 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 GAD1Q99259 594 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 CCDC94Q9BW85 323 aaPredicted RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 MTMR12Q9C0I1 747 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
CLN5-213ENST00000636681 TUBGCP4Q9UGJ1 667 aa11.56□□□□□ -0.56
CLN5-213ENST00000636681 KIAA1671Q9BY89 1806 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 LGALS16A8MUM7 142 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 RNF225M0QZC1 329 aaPredicted RBP11.55□□□□□ -0.56
CLN5-213ENST00000636681 PPEF2O14830 753 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 EPHB6O15197 1021 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 UPP2O95045 317 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 VNN1O95497 513 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 GNA14O95837 355 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 ACTN1P12814 892 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 ITGA4P13612 1032 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 KRT13P13646 458 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 CAPN2P17655 700 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 TNNI1P19237 187 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 SLC9A1P19634 815 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 MLH1P40692 756 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 FMO5P49326 533 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 SCNN1GP51170 649 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 TFAMQ00059 246 aaKnown RBP11.55□□□□□ -0.56
CLN5-213ENST00000636681 UBXN1Q04323 297 aa11.55□□□□□ -0.56
CLN5-213ENST00000636681 SOX4Q06945 474 aaPredicted RBP11.55□□□□□ -0.56
CLN5-213ENST00000636681 CLLU1OSQ5K130 101 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms