RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 FEM1BQ9UK73 627 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 PTPN22Q9Y2R2 807 aa15.56■□□□□ 0.08
CLN6-215ENST00000636674 FAM170AA1A519 330 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 GRIN3BO60391 1043 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 VIMP08670 466 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 IVDP26440 423 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 GTF2H1P32780 548 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 GPR162Q16538 588 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 SNRNP35Q16560 246 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 GRIPAP1Q4V328 841 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 SGO2Q562F6 1265 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 MAP4K3Q8IVH8 894 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 PARD3BQ8TEW8 1205 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 GRK7Q8WTQ7 553 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 KIFAP3Q92845 792 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 SNF8Q96H20 258 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 BTBD6Q96KE9 485 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 NT5C1BQ96P26 610 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 AGO4Q9HCK5 861 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 EXOC7Q9UPT5 735 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 UBIAD1Q9Y5Z9 338 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 CLDN3O15551 220 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 ATP2C2O75185 946 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 ATP6V1G2O95670 118 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 DLATP10515 647 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 MAP2K1Q02750 393 aaPredicted RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 CLEC16AQ2KHT3 1053 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 VSTM1Q6UX27 236 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 CRELD2Q6UXH1 353 aaPredicted RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 MAEAQ7L5Y9 396 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 C4orf19Q8IY42 314 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 CCDC63Q8NA47 563 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 UHMK1Q8TAS1 419 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 C7orf43Q8WVR3 580 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 ARHGEF2Q92974 986 aaKnown RBP15.55■□□□□ 0.08
CLN6-215ENST00000636674 FAM81BQ96LP2 452 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 FBXL18Q96ME1 805 aa15.55■□□□□ 0.08
CLN6-215ENST00000636674 ASTN2O75129 1339 aaPredicted RBP15.54■□□□□ 0.08
CLN6-215ENST00000636674 O00370 1275 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 SORBS3O60504 671 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 TTC4O95801 387 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 ICAM1P05362 532 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 ADSSP30520 456 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 YWHABP31946 246 aaKnown RBP15.54■□□□□ 0.08
CLN6-215ENST00000636674 SLC1A1P43005 524 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 PTP4A2Q12974 167 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 ENOSF1Q7L5Y1 443 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 CBWD2Q8IUF1 395 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 GBP7Q8N8V2 638 aaPredicted RBP15.54■□□□□ 0.08
CLN6-215ENST00000636674 FBXL13Q8NEE6 735 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 PLCD4Q9BRC7 762 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 CXorf56Q9H5V9 222 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 ACP6Q9NPH0 428 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 LGALS13Q9UHV8 139 aa15.54■□□□□ 0.08
CLN6-215ENST00000636674 USP15Q9Y4E8 981 aaPredicted RBP15.54■□□□□ 0.08
CLN6-215ENST00000636674 TMEM120BA0PK00 339 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 MYBL1P10243 752 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.081e-7■■□□□ 13.8
CLN6-215ENST00000636674 GCNT1Q02742 428 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 LONRF1Q17RB8 773 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 TKFCQ3LXA3 575 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 GALNTL6Q49A17 601 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 PCNX4Q63HM2 1172 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 STYK1Q6J9G0 422 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 HIBCHQ6NVY1 386 aaPredicted RBP15.53■□□□□ 0.08
CLN6-215ENST00000636674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLN6-215ENST00000636674 CCDC25Q86WR0 208 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 RELL1Q8IUW5 271 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 MFSD14AQ96MC6 490 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 DDX23Q9BUQ8 820 aaKnown RBP15.53■□□□□ 0.08
CLN6-215ENST00000636674 ATP6V0A4Q9HBG4 840 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 TBC1D22BQ9NU19 505 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 TMOD2Q9NZR1 351 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 COL20A1Q9P218 1284 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 ADGRA3Q8IWK6 1321 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 ARID2Q68CP9 1835 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 SLC16A4O15374 487 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
CLN6-215ENST00000636674 GAS8O95995 478 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 UNGP13051 313 aaPredicted RBP15.53■□□□□ 0.08
CLN6-215ENST00000636674 EZRP15311 586 aaKnown RBP15.53■□□□□ 0.08
CLN6-215ENST00000636674 DPEP1P16444 411 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 IFNAR2P48551 515 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 CENPCQ03188 943 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 MKRN3Q13064 507 aaKnown RBP15.53■□□□□ 0.08
CLN6-215ENST00000636674 USP37Q86T82 979 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 TMEM161BQ8NDZ6 487 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 IL31RAQ8NI17 732 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 FAM151AQ8WW52 585 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 CKAP2Q8WWK9 683 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 TRIM11Q96F44 468 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 DCLK3Q9C098 648 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 NOD2Q9HC29 1040 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 ABCF3Q9NUQ8 709 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 RAB20Q9NX57 234 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 ASIC3Q9UHC3 531 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 TBX20Q9UMR3 447 aa15.53■□□□□ 0.08
CLN6-215ENST00000636674 WDR81Q562E7 1941 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms