RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 LRRC37BQ96QE4 947 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 TSEN34Q9BSV6 310 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 SMARCAD1Q9H4L7 1026 aa18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 BLMP54132 1417 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-227ENST00000636549 MAPK13O15264 365 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 MRPL28Q13084 256 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 RPAINQ86UA6 219 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 APPL1Q9UKG1 709 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 SH2B2O14492 632 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 NDUFS3O75489 264 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 ADRA2BP18089 450 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 A8MX80 341 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 KPNA7A9QM74 516 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 NR3C1P04150 777 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 FAM167BQ9BTA0 163 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 MARCOQ9UEW3 520 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 STAP1Q9ULZ2 295 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 NAALADL2Q58DX5 795 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 IPMKQ8NFU5 416 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 NDST4Q9H3R1 872 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 OCA2Q04671 838 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 ATPAF2Q8N5M1 289 aa18.81■□□□□ 0.6
CACNA1A-227ENST00000636549 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 SMTNL2Q2TAL5 461 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 SEZ6Q53EL9 994 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 PPP1R18Q6NYC8 613 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 SPON1Q9HCB6 807 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 MAN1A2O60476 641 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 WDR47O94967 919 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 PRKCBP05771 671 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 CYP21A2P08686 494 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 MLNP12872 115 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 ITGA4P13612 1032 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 DDX50Q9BQ39 737 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 ACAD9Q9H845 621 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 LAD1O00515 517 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 SKIP12755 728 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 PHACTR4Q8IZ21 702 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 OR9Q1Q8NGQ5 310 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 NMRK2Q9NPI5 230 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 ABCC10Q5T3U5 1492 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 PCDH8O95206 1070 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 PCNAP12004 261 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 FGFR4P22455 802 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 RPS7P62081 194 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 MDM2Q00987 491 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 NOL9Q5SY16 702 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 LZTS3O60299 673 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 ZC3H11AO75152 810 aaKnown RBP eCLIP18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 TYK2P29597 1187 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 MTBPQ96DY7 904 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 PLEKHA8Q96JA3 519 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 ATP10AO60312 1499 aa18.8■□□□□ 0.6
CACNA1A-227ENST00000636549 NPTXRO95502 500 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 HNRNPCP07910 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 ERVK-10P10266 1014 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 UBE3CQ15386 1083 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 TMEM35BQ8NCS4 154 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 OXER1Q8TDS5 423 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 CCL15-CCL14A0A0B4J2E2 113 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 ENO1P06733 434 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 CCL15Q16663 113 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 GAS2L3Q86XJ1 694 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 DCAF4Q8WV16 495 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 CHRM3P20309 590 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 PALMDQ9NP74 551 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 AGO2Q9UKV8 859 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 PTPRKQ15262 1439 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 ARHGAP15Q53QZ3 475 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 ZBTB5O15062 677 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 MAP3K6O95382 1288 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 FTLP02792 175 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 ALDH7A1P49419 539 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 PLA2G4FQ68DD2 849 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 KRT77Q7Z794 578 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 CAMKK1Q8N5S9 505 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 PPP1R13LQ8WUF5 828 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 SLC39A10Q9ULF5 831 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 SLC8A1P32418 973 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 GNASQ5JWF2 1037 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 BBS2Q9BXC9 721 aa18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 CHORDC1Q9UHD1 332 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-227ENST00000636549 LUC7L3O95232 432 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 MMEP08473 750 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 COASYQ13057 564 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 BTN2A1Q7KYR7 527 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 PBKQ96KB5 322 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 INTS2Q9H0H0 1204 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 E4F1Q66K89 784 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 PIF1Q9H611 641 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 IQCA1LA6NCM1 817 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 A6NNZ2 444 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 CYP26A1O43174 497 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 GSNP06396 782 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms