RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 APOL5Q9BWW9 433 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 FAM47E-STBD1D6RA91 191 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 PCDH8O95206 1070 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 MBL2P11226 248 aaPredicted RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 C16orf72Q14CZ0 275 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 DEFB129Q9H1M3 183 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 ENDOD1O94919 500 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 RBP5P82980 135 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 PTRHD1Q6GMV3 140 aaKnown RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 UNC13DQ70J99 1090 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 CDKL3Q8IVW4 592 aaPredicted RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 SLITRK1Q96PX8 696 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 EXO5Q9H790 373 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 KLHL11Q9NVR0 708 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 DTNAQ9Y4J8 743 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 KDM5AP29375 1690 aaKnown RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 CYP27B1O15528 508 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 NOL9Q5SY16 702 aaKnown RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 ZNF564Q8TBZ8 553 aaPredicted RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 GTF3C2Q8WUA4 911 aaPredicted RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 INTS2Q9H0H0 1204 aaKnown RBP16.99■□□□□ 0.31
CLN5-208ENST00000636183 OSGEPL1Q9H4B0 414 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 BFARQ9NZS9 450 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 TMEM63CQ9P1W3 806 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 PCDHB12Q9Y5F1 795 aa16.99■□□□□ 0.31
CLN5-208ENST00000636183 DIAPH2O60879 1101 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 HSPA1AP0DMV8 641 aaKnown RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 HSPA1BP0DMV9 641 aaKnown RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 UBE3AQ05086 875 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 MMS22LQ6ZRQ5 1243 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 SEPT1Q8WYJ6 367 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 SENP2Q9HC62 589 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 PPARGC1AQ9UBK2 798 aaKnown RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 CHSY1Q86X52 802 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 TTC39CQ8N584 583 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 SPATA18Q8TC71 538 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 FMO2Q99518 471 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 ADA2Q9NZK5 511 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 URODP06132 367 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 HPCAP84074 193 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 KDM1AO60341 852 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 KRT38O76015 456 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 CIPCQ9C0C6 399 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 ING2Q9H160 280 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 ZC4H2Q9NQZ6 224 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 GIMAP4Q9NUV9 329 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 PNMA8BQ9ULN7 279 aaPredicted RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 ARHGAP26Q9UNA1 814 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 STXBP3O00186 592 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 GPS1Q13098 491 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 PFKFB3Q16875 520 aaPredicted RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 SGO1Q5FBB7 561 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 ZRANB3Q5FWF4 1079 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 SLC7A14Q8TBB6 771 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 FAM49BQ9NUQ9 324 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 NDOR1Q9UHB4 597 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 APOBEC2Q9Y235 224 aaKnown RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 NPHP3-ACAD11A0A0J9YXS1 232 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 SKAP2O75563 359 aaPredicted RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 IMPDH2P12268 514 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 GRAMD1BQ3KR37 738 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 SV2CQ496J9 727 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 CSGALNACT1Q8TDX6 532 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 JADE3Q92613 823 aa16.98■□□□□ 0.31
CLN5-208ENST00000636183 NOVA2Q9UNW9 492 aaKnown RBP16.98■□□□□ 0.31
CLN5-208ENST00000636183 PTPRTO14522 1441 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 USP6P35125 1406 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 FRMD3A2A2Y4 597 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 SLC25A27O95847 323 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 CKMP06732 381 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 GUCA1AP43080 201 aaPredicted RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 FAM129AQ9BZQ8 928 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 IFT88Q13099 833 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 BFSP2Q13515 415 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 KRT39Q6A163 491 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 WDR75Q8IWA0 830 aaKnown RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 EIF2AQ9BY44 585 aaKnown RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 DMAP1Q9NPF5 467 aaPredicted RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 AKAP7Q9P0M2 348 aaPredicted RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 CTNND1O60716 968 aaKnown RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 GRAP2O75791 330 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 KRT7P08729 469 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 CASP1P29466 404 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 CATSPER3Q86XQ3 398 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 KLHL29Q96CT2 875 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 MSRAQ9UJ68 235 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 PPIEQ9UNP9 301 aaKnown RBP16.97■□□□□ 0.31
CLN5-208ENST00000636183 TRIM49BA6NDI0 452 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 CD4P01730 458 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 SKOR1P84550 965 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 ALFQ53S48 1182 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 HASPINQ8TF76 798 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 GTF2A1LQ9UNN4 478 aa16.97■□□□□ 0.31
CLN5-208ENST00000636183 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms