RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GNA11P29992 359 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 PSMC5P62195 406 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 STPG1Q5TH74 334 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 MAP4K3Q8IVH8 894 aa20.23■□□□□ 0.83
CLN6-212ENST00000636020 TRMT61BQ9BVS5 477 aaKnown RBP20.23■□□□□ 0.83
CLN6-212ENST00000636020 LSM14BQ9BX40 385 aaKnown RBP20.23■□□□□ 0.83
CLN6-212ENST00000636020 DMXL2Q8TDJ6 3036 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 ASAP2O43150 1006 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 ZNF806P0C7X5 589 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 CEBPBP17676 345 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 AKAP5P24588 427 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 PCBP1Q15365 356 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLN6-212ENST00000636020 CREB3L3Q68CJ9 461 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 EXOC8Q8IYI6 725 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 HACE1Q8IYU2 909 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 C12orf50Q8NA57 414 aaPredicted RBP20.22■□□□□ 0.83
CLN6-212ENST00000636020 HASPINQ8TF76 798 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 IRF7Q92985 503 aa20.22■□□□□ 0.83
CLN6-212ENST00000636020 LSG1Q9H089 658 aaKnown RBP20.22■□□□□ 0.83
CLN6-212ENST00000636020 ZNF334Q9HCZ1 680 aaPredicted RBP20.22■□□□□ 0.83
CLN6-212ENST00000636020 SOBPA7XYQ1 873 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 NRG2O14511 850 aaPredicted RBP20.21■□□□□ 0.83
CLN6-212ENST00000636020 OR1D2P34982 312 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 PTENP60484 403 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 Q4G0T1 1027 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 HEATR6Q6AI08 1181 aaKnown RBP20.21■□□□□ 0.83
CLN6-212ENST00000636020 PDXDC1Q6P996 788 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 CEP68Q76N32 757 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 FERMT3Q86UX7 667 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 CEP170P1Q96L14 293 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 ARRDC1-AS1Q9H2J1 176 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 ZFP14Q9HCL3 533 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 KLK14Q9P0G3 267 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 PPME1Q9Y570 386 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 PIAS3Q9Y6X2 628 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 NBEAQ8NFP9 2946 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 COL4A2P08572 1712 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 ZMYM2Q9UBW7 1377 aa20.21■□□□□ 0.83
CLN6-212ENST00000636020 DSPP15924 2871 aaKnown RBP20.2■□□□□ 0.83
CLN6-212ENST00000636020 AXIN1O15169 862 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 KIF4AO95239 1232 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 ADD1P35611 737 aaKnown RBP20.2■□□□□ 0.82
CLN6-212ENST00000636020 RFC5P40937 340 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 EXOSC10Q01780 885 aaKnown RBP20.2■□□□□ 0.82
CLN6-212ENST00000636020 NCBP1Q09161 790 aaKnown RBP20.2■□□□□ 0.82
CLN6-212ENST00000636020 PTGDRQ13258 359 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 TUSC3Q13454 348 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 CCDC6Q16204 474 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 FAM78AQ5JUQ0 283 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 BICD2Q8TD16 824 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 COL26A1Q96A83 441 aa20.2■□□□□ 0.82
CLN6-212ENST00000636020 TMEM121BQ9BXQ6 578 aaPredicted RBP20.2■□□□□ 0.82
CLN6-212ENST00000636020 TRIM6Q9C030 488 aaPredicted RBP20.2■□□□□ 0.82
CLN6-212ENST00000636020 ARF4P18085 180 aaPredicted RBP20.19■□□□□ 0.82
CLN6-212ENST00000636020 AMHR2Q16671 573 aa20.19■□□□□ 0.82
CLN6-212ENST00000636020 TCP11Q8WWU5 503 aa20.19■□□□□ 0.82
CLN6-212ENST00000636020 LOXL4Q96JB6 756 aa20.19■□□□□ 0.82
CLN6-212ENST00000636020 TCEANC2Q96MN5 208 aa20.19■□□□□ 0.82
CLN6-212ENST00000636020 BMP2KQ9NSY1 1161 aaPredicted RBP20.19■□□□□ 0.82
CLN6-212ENST00000636020 VWA8A3KMH1 1905 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 KLF18A0A0U1RQI7 1052 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 CASTOR2A6NHX0 329 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 EML1O00423 815 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 PTPN2P17706 415 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 CCNE1P24864 410 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 GDI1P31150 447 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 HOXA6P31267 233 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 QARSP47897 775 aaKnown RBP20.18■□□□□ 0.82
CLN6-212ENST00000636020 ELAVL2Q12926 359 aaKnown RBP20.18■□□□□ 0.82
CLN6-212ENST00000636020 PRSS36Q5K4E3 855 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 PSAPL1Q6NUJ1 521 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 VITQ6UXI7 678 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 IFNLR1Q8IU57 520 aaPredicted RBP20.18■□□□□ 0.82
CLN6-212ENST00000636020 ETNPPLQ8TBG4 499 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 ASB16Q96NS5 453 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 WRAP73Q9P2S5 460 aaPredicted RBP20.18■□□□□ 0.82
CLN6-212ENST00000636020 PARP2Q9UGN5 583 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 WASF3Q9UPY6 502 aa20.18■□□□□ 0.82
CLN6-212ENST00000636020 TICRRQ7Z2Z1 1910 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 SPAG17Q6Q759 2223 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 CYP3A7-CYP3A51PA0A087WV96 503 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 INO80B-WBP1J3KQ70 363 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 PSMC3P17980 439 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 CYP3A7P24462 503 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 RCAN1P53805 252 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 EMC2Q15006 297 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 WDR5BQ86VZ2 330 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 TCEAL4Q96EI5 215 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 RBM12Q9NTZ6 932 aaKnown RBP20.17■□□□□ 0.82
CLN6-212ENST00000636020 C2orf42Q9NWW7 574 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 MTRRQ9UBK8 725 aa20.17■□□□□ 0.82
CLN6-212ENST00000636020 TMEM8BA6NDV4 472 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 SRRM3A6NNA2 597 aaPredicted RBP20.16■□□□□ 0.82
CLN6-212ENST00000636020 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
CLN6-212ENST00000636020 DKC1O60832 514 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLN6-212ENST00000636020 MICAL2O94851 1124 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 EPN2O95208 641 aa20.16■□□□□ 0.82
CLN6-212ENST00000636020 NPTXRO95502 500 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms