RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 ARL5CA6NH57 179 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 ZNF233A6NK53 670 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 LRRIQ3A6PVS8 624 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 CETN3O15182 167 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 SLC16A3O15427 465 aaKnown RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 AP5Z1O43299 807 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 EXOC3O60645 756 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 DGKIO75912 1065 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 LDHAP00338 332 aaKnown RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 ITGA4P13612 1032 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 ATP1A3P13637 1013 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 KCNE1P15382 129 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 IGFBP6P24592 240 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 PSMC2P35998 433 aaKnown RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 HTRA4P83105 476 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 SOX4Q06945 474 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 SPAG1Q07617 926 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 PSMD6Q15008 389 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 TMEM132AQ24JP5 1023 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 FAM109BQ6ICB4 259 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 PSRC1Q6PGN9 363 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 C15orf39Q6ZRI6 1047 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 TRIM59Q8IWR1 403 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 ACAP3Q96P50 834 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 PPP1R10Q96QC0 940 aaKnown RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 GAD1Q99259 594 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 POP1Q99575 1024 aaKnown RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 TSG101Q99816 390 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 LBHD1Q9BQE6 289 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 THAP9Q9H5L6 903 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 TOPORSQ9NS56 1045 aaPredicted RBP9.06□□□□□ -0.96
MECP2-220ENST00000631210 CNTN3Q9P232 1028 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 HCSTQ9UBK5 93 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 GIT1Q9Y2X7 761 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 GBF1Q92538 1859 aa9.06□□□□□ -0.96
MECP2-220ENST00000631210 TRIOBPQ9H2D6 2365 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 SMIM28A0A1B0GU29 152 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 EFCAB14O75071 495 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 NFICP08651 508 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 SKIP12755 728 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 RPL13P26373 211 aaKnown RBP9.05□□□□□ -0.96
MECP2-220ENST00000631210 BMP8BP34820 402 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 MLH1P40692 756 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 ENPEPQ07075 957 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 HSP90AA4PQ58FG1 418 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 MIIPQ5JXC2 388 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 JADE1Q6IE81 842 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 DPY19L2P1Q6NXN4 242 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 FAM186BQ8IYM0 893 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 OR5B17Q8NGF7 314 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 HELQQ8TDG4 1101 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 SLC35C1Q96A29 364 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 CNOT6LQ96LI5 555 aaKnown RBP9.05□□□□□ -0.96
MECP2-220ENST00000631210 CCDC94Q9BW85 323 aaPredicted RBP9.05□□□□□ -0.96
MECP2-220ENST00000631210 APOL6Q9BWW8 343 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
MECP2-220ENST00000631210 RSAD1Q9HA92 442 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 PLEKHA5Q9HAU0 1116 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 KIAA1586Q9HCI6 787 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 RBAKQ9NYW8 714 aaPredicted RBP9.05□□□□□ -0.96
MECP2-220ENST00000631210 PARP2Q9UGN5 583 aa9.05□□□□□ -0.96
MECP2-220ENST00000631210 TDRD15B5MCY1 1934 aaKnown RBP9.05□□□□□ -0.96
MECP2-220ENST00000631210 SCN1AP35498 2009 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 KIAA1671Q9BY89 1806 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 LRRC10BA6NIK2 292 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 GRXCR1A8MXD5 290 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 LRRN2O75325 713 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 DDHD2O94830 711 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 GJB5O95377 273 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 CAVIN2O95810 425 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 AMHP03971 560 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 C4BPAP04003 597 aaKnown RBP9.04□□□□□ -0.96
MECP2-220ENST00000631210 TRIM49P0CI25 452 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 TRIM49CP0CI26 452 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 ACTN1P12814 892 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 MATR3P43243 847 aaKnown RBP eCLIP9.04□□□□□ -0.961e-6■■■■□ 24.8
MECP2-220ENST00000631210 SCNN1GP51170 649 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 VAMP7P51809 220 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 GUCY2FP51841 1108 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 DSC1Q08554 894 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 BFSP1Q12934 665 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 KRT31Q15323 416 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 KYAT1Q16773 422 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 TCP11X2Q5H9J9 407 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 GLRA4Q5JXX5 417 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 LMBRD2Q68DH5 695 aaPredicted RBP9.04□□□□□ -0.96
MECP2-220ENST00000631210 CD300LGQ6UXG3 332 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 ZNF280BQ86YH2 543 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 RNF169Q8NCN4 708 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 RNF214Q8ND24 703 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 PHOSPHO2Q8TCD6 241 aa9.04□□□□□ -0.96
MECP2-220ENST00000631210 SP7Q8TDD2 431 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms