RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 PASKQ96RG2 1323 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 TMEM150BA6NC51 233 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 ATP9AO75110 1047 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 FAM107AO95990 144 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 MMEP08473 750 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 PAEPP09466 180 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 NUDT17P0C025 328 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 CYP11B1P15538 503 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 GARTP22102 1010 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 ADSSP30520 456 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 FNTAP49354 379 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 PEX5P50542 639 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 PMS2P54278 862 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 RTP1P59025 263 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 MTMR2Q13614 643 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 DENND2CQ68D51 928 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 ACAD10Q6JQN1 1059 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 SLC47A2Q86VL8 602 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 PRELID2Q8N945 189 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 C12orf50Q8NA57 414 aaPredicted RBP8.65□□□□□ -1.02
GPC3-204ENST00000631057 MYCBPAPQ8TBZ2 947 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 POMGNT1Q8WZA1 660 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 GLG1Q92896 1179 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 CCDC127Q96BQ5 260 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 SAAL1Q96ER3 474 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 CDHR1Q96JP9 859 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 TEPSINQ96N21 525 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 CCT8L2Q96SF2 557 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 NTPCRQ9BSD7 190 aaKnown RBP8.65□□□□□ -1.02
GPC3-204ENST00000631057 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
GPC3-204ENST00000631057 PABPC3Q9H361 631 aaKnown RBP8.65□□□□□ -1.02
GPC3-204ENST00000631057 RPAP3Q9H6T3 665 aaPredicted RBP8.65□□□□□ -1.02
GPC3-204ENST00000631057 RNF146Q9NTX7 359 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 RAB20Q9NX57 234 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 SLC12A6Q9UHW9 1150 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 KCNG1Q9UIX4 513 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 ATP8A1Q9Y2Q0 1164 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 PCDHA3Q9Y5H8 950 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 LCTP09848 1927 aa8.65□□□□□ -1.02
GPC3-204ENST00000631057 BRCA1P38398 1863 aaKnown RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 LOC285556D6RIA3 1793 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 NFASCO94856 1347 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 E7EVH7 732 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 VWA5AO00534 786 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 ATMINO43313 823 aaPredicted RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 DGAT1O75907 488 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 PSAPP07602 524 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 NR3C2P08235 984 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 MYBL1P10243 752 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 KCNA3P22001 575 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 SCP2P22307 547 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 RPS12P25398 132 aaKnown RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 COPB2P35606 906 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 COILP38432 576 aaPredicted RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 MARCKSL1P49006 195 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 OAZ1P54368 228 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 PLTPP55058 493 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 RWDD2BP57060 319 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 ZNF280AP59817 542 aaPredicted RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 BPIFB4P59827 614 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 GCNT1Q02742 428 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 BAATQ14032 418 aaPredicted RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 CLEC16AQ2KHT3 1053 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 BRDTQ58F21 947 aaPredicted RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 CCDC137Q6PK04 289 aaKnown RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 ZDHHC24Q6UX98 284 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 ANO5Q75V66 913 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 YTHDF3Q7Z739 585 aaKnown RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 VSIG10LQ86VR7 867 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 SLC13A5Q86YT5 568 aaPredicted RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 GPD1LQ8N335 351 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 OTUD6BQ8N6M0 293 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 MAIP1Q8WWC4 291 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 TLCD1Q96CP7 247 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 C18orf8Q96DM3 657 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 TRIM11Q96F44 468 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 CEP170P1Q96L14 293 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 IFT74Q96LB3 600 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 SH2D3AQ9BRG2 576 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 KIAA1586Q9HCI6 787 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 C1orf112Q9NSG2 853 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 GABBR1Q9UBS5 961 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 NOVA2Q9UNW9 492 aaKnown RBP8.65□□□□□ -1.03
GPC3-204ENST00000631057 USTQ9Y2C2 406 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 SNX24Q9Y343 169 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 CD2APQ9Y5K6 639 aa8.65□□□□□ -1.03
GPC3-204ENST00000631057 GMNCA6NCL1 334 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 ANKRD65E5RJM6 399 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 HNRNPDLO14979 420 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 MEFVO15553 781 aaPredicted RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 TRAPPC3O43617 180 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 STAM2O75886 525 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 ZBTB7AO95365 584 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 KRT5P13647 590 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 MAN1A1P33908 653 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 RPL21P46778 160 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 MAGOHP61326 146 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 BYSLQ13895 437 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms