RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 KRT222Q8N1A0 295 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 TMEM130Q8N3G9 435 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 METTL13Q8N6R0 699 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 PROCA1Q8NCQ7 364 aaPredicted RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 TRIM58Q8NG06 486 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 RDM1Q8NG50 284 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 HELQQ8TDG4 1101 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 TAS1R2Q8TE23 839 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 NSUN6Q8TEA1 469 aaKnown RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 PARD3BQ8TEW8 1205 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 AENQ8WTP8 325 aaKnown RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 U2AF1L4Q8WU68 220 aaKnown RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 SCFD2Q8WU76 684 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 DDX1Q92499 740 aaKnown RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 KCNN1Q92952 543 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 SAAL1Q96ER3 474 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 ZBTB45Q96K62 511 aaPredicted RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 NOX5Q96PH1 765 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 ACCSQ96QU6 501 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 TEX13BQ9BXU2 312 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 FHDC1Q9C0D6 1143 aaPredicted RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 DEF6Q9H4E7 631 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 ACAD9Q9H845 621 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 AS3MTQ9HBK9 375 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.78□□□□□ -1.648e-8■■■■■ 44.9
CHD2-220ENST00000630813 RBM12Q9NTZ6 932 aaKnown RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 ARHGAP28Q9P2N2 729 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 RBPJLQ9UBG7 517 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 APEX2Q9UBZ4 518 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 NOCTQ9UK39 431 aaKnown RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 PRDM4Q9UKN5 801 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 COG5Q9UP83 839 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 COQ4Q9Y3A0 265 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 NR2E1Q9Y466 385 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 MAP4K5Q9Y4K4 846 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 HYOU1Q9Y4L1 999 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 SAMM50Q9Y512 469 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 PCDHA10Q9Y5I2 948 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 PPP2R3BQ9Y5P8 575 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 MAFBQ9Y5Q3 323 aaPredicted RBP4.78□□□□□ -1.64
CHD2-220ENST00000630813 SIP14410 1827 aa4.78□□□□□ -1.64
CHD2-220ENST00000630813 ATP8B3O60423 1300 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 DNAJC25-GNG10A0A024R161 153 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 TARSL2A2RTX5 802 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 ABLIM1O14639 778 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 MAFGO15525 162 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 MEFVO15553 781 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 FAM189A1O60320 539 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 BUB1BO60566 1050 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 FARP2O94887 1054 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 KIF4AO95239 1232 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 SYF2O95926 243 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 GLI1P08151 1106 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 FAM153BP0C7A2 387 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 ITGA4P13612 1032 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 UBA1P22314 1058 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 ANXA13P27216 316 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 OAS2P29728 719 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 ECHS1P30084 290 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 STAT1P42224 750 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 ALDH5A1P51649 535 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 RTP1P59025 263 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 RNASE9P60153 205 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 CLDN10P78369 228 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 POU5F1Q01860 360 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 PRKCEQ02156 737 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 SP4Q02446 784 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 MAP2K1Q02750 393 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 CYP24A1Q07973 514 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 DMTNQ08495 405 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 ALCAMQ13740 583 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 SMC1AQ14683 1233 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 CASP8Q14790 479 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 TERF2Q15554 542 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 ARHGAP44Q17R89 818 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 FAM153CQ494X1 144 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 PPP1R26Q5T8A7 1209 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 SEPT14Q6ZU15 432 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHD2-220ENST00000630813 CYFIP1Q7L576 1253 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 NOP9Q86U38 636 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 NLRX1Q86UT6 975 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 NT5DC3Q86UY8 548 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 FAM71AQ8IYT1 594 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 SYCP3Q8IZU3 236 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 MSL3Q8N5Y2 521 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 XXYLT1Q8NBI6 393 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 TSEN2Q8NCE0 465 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 GOLGA5Q8TBA6 731 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 CASKIN2Q8WXE0 1202 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 DHX38Q92620 1227 aaKnown RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 TMEM143Q96AN5 459 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 ZBTB10Q96DT7 871 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 CEP170P1Q96L14 293 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 GDAP1L1Q96MZ0 367 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 SPAG5Q96R06 1193 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 INSM2Q96T92 566 aaPredicted RBP4.77□□□□□ -1.65
CHD2-220ENST00000630813 AGPAT1Q99943 283 aa4.77□□□□□ -1.65
CHD2-220ENST00000630813 PI4K2AQ9BTU6 479 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms