RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 RGL1Q9NZL6 768 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 EPHA10Q5JZY3 1008 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 SDE2Q6IQ49 451 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 C16orf87Q6PH81 154 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 TGS1Q96RS0 853 aaKnown RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 ZFYVE28Q9HCC9 887 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 CYP27B1O15528 508 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 DYNC1LI2O43237 492 aaPredicted RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 RGS7P49802 495 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 AP2B1P63010 937 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 TMED8Q6PL24 325 aaPredicted RBP12.4□□□□□ -0.42
SHPRH-211ENST00000629427 RFX8Q6ZV50 586 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 HAUS6Q7Z4H7 955 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 OR9Q1Q8NGQ5 310 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 BTN2A2Q8WVV5 523 aa12.4□□□□□ -0.42
SHPRH-211ENST00000629427 PVALEFA0A1B0GWK0 134 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 PJA2O43164 708 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ATP5HO75947 161 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 RARBP10826 455 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 PCSK7Q16549 785 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 MGAT5BQ3V5L5 792 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 TUFT1Q9NNX1 390 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
SHPRH-211ENST00000629427 NCK2O43639 380 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ORC2Q13416 577 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-211ENST00000629427 TEDDM1Q5T9Z0 273 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 AP1ARQ63HQ0 302 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SMARCAD1Q9H4L7 1026 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 CYP26A1O43174 497 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 APRTP07741 180 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 CDC27P30260 824 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 OR1G1P47890 313 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ANKMY2Q8IV38 441 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 C18orf8Q96DM3 657 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SH2D3AQ9BRG2 576 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 KRT87PA6NCN2 255 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 HIF1AQ16665 826 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■□□ 16
SHPRH-211ENST00000629427 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SCP2P22307 547 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 NCAPHQ15003 741 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SLC30A5Q8TAD4 765 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ARL8AQ96BM9 186 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 TMEM161AQ9NX61 479 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SNX9Q9Y5X1 595 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
SHPRH-211ENST00000629427 RTN2O75298 545 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 ALDH1A3P47895 512 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SESN2P58004 480 aaPredicted RBP12.39□□□□□ -0.43
SHPRH-211ENST00000629427 CDC42EP1Q00587 391 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 TWF1Q12792 350 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 SCFD1Q8WVM8 642 aa12.39□□□□□ -0.43
SHPRH-211ENST00000629427 NDUFS3O75489 264 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 AKR1B1P15121 316 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 CEP70Q8NHQ1 597 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 SPON1Q9HCB6 807 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 MEFVO15553 781 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-211ENST00000629427 MYBP10242 640 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 CYP2B6P20813 491 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 ATPAF2Q8N5M1 289 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 GOLPH3LQ9H4A5 285 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 TET3O43151 1660 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 RPS6KA5O75582 802 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HIST1H2AGP0C0S8 130 aaPredicted RBP12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HIST1H2ADP20671 130 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 ICA1LQ8NDH6 482 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 CPA5Q8WXQ8 436 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HIST1H2AHQ96KK5 128 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 MED15Q96RN5 788 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HIST1H2AJQ99878 128 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 H2AFJQ9BTM1 129 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 IZUMO3Q5VZ72 239 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 SIRT2Q8IXJ6 389 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 C2CD2LO14523 706 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 KCNQ2O43526 872 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 BRAFP15056 766 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 KRT17Q04695 432 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 PRKCQQ04759 706 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 FRMD5Q7Z6J6 570 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 USP33Q8TEY7 942 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
SHPRH-211ENST00000629427 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
SHPRH-211ENST00000629427 ACTR2P61160 394 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 GRAMD4Q6IC98 578 aa12.38□□□□□ -0.43
SHPRH-211ENST00000629427 CCDC78A2IDD5 438 aa12.37□□□□□ -0.43
SHPRH-211ENST00000629427 C5orf58C9J3I9 102 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms