RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NT5C1B-RDH14C9J2C7 533 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 FGF18O76093 207 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ADCY5O95622 1261 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ERVFC1P60507 584 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 HMGN5P82970 282 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 UBAP2LQ14157 1087 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 KIAA0907Q7Z7F0 614 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 SMRP1Q8NCR6 262 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 IGDCC4Q8TDY8 1250 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 EDAQ92838 391 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF274Q96GC6 653 aaPredicted RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 ZCCHC2Q9C0B9 1178 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 MAF1Q9H063 256 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 NUP62CLQ9H1M0 184 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 CLSTN2Q9H4D0 955 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 LY9Q9HBG7 655 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 DDX19AQ9NUU7 478 aaKnown RBP5.39□□□□□ -1.55
LINC00550-201ENST00000629293 UBP1Q9NZI7 540 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 CLEC1BQ9P126 229 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 AKT3Q9Y243 479 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 SIP14410 1827 aa5.39□□□□□ -1.55
LINC00550-201ENST00000629293 FRYLO94915 3013 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 GFRA3O60609 400 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 XYLBO75191 536 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 GLP2RO95838 553 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 CCDC192P0DO97 292 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 TFE3P19532 575 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PHKA2P46019 1235 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 GNAQP50148 359 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 VCPP55072 806 aaKnown RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 GHRHRQ02643 423 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 HERC4Q5GLZ8 1057 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 SWSAP1Q6NVH7 229 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 SAMD3Q8N6K7 520 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PRSS33Q8NF86 280 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 TMEM40Q8WWA1 233 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PCYT2Q99447 389 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 TCF25Q9BQ70 676 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 SPZ1Q9BXG8 430 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 FTHL17Q9BXU8 183 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 LMAN2LQ9H0V9 348 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 TOR4AQ9NXH8 423 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ZFATQ9P243 1243 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PUF60Q9UHX1 559 aaKnown RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ST3GAL5Q9UNP4 418 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 NOC2LQ9Y3T9 749 aaKnown RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 C5orf67F2Z3F1 127 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 CHMP2AO43633 222 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 MGEA5O60502 916 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ASGR2P07307 311 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 CELA3AP09093 270 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ACPPP15309 386 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 FGFR4P22455 802 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PDIA3P30101 505 aaKnown RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 NT5C2P49902 561 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 CLCN3P51790 818 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 MGAT3Q09327 533 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 OTOGLQ3ZCN5 2332 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 MB21D2Q8IYB1 491 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 LRRC71Q8N4P6 559 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 FBXL6Q8N531 539 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 EFHBQ8N7U6 833 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 DEPDC7Q96QD5 511 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PLVAPQ9BX97 442 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 MFSD1Q9H3U5 465 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ATP6V0A4Q9HBG4 840 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 AAASQ9NRG9 546 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 DACT1Q9NYF0 836 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 IGSF9BQ9UPX0 1349 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 HIDE1A8MVS5 230 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PAGE1O75459 146 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 DDAH1O94760 285 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 LINC00271P0C7V0 271 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 CBX2Q14781 532 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ATL3Q6DD88 541 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 XRRA1Q6P2D8 792 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 SV2BQ7L1I2 683 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 CMTR2Q8IYT2 770 aaKnown RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 C12orf76Q8N812 135 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 FLCNQ8NFG4 579 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 SNIP1Q8TAD8 396 aaKnown RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 AUTS2Q8WXX7 1259 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF689Q96CS4 500 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 MRFAP1L1Q96HT8 127 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 SH2D3AQ9BRG2 576 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 PHF7Q9BWX1 381 aaPredicted RBP5.38□□□□□ -1.55
LINC00550-201ENST00000629293 LRRC3Q9BY71 257 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 TMX1Q9H3N1 280 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 JADE2Q9NQC1 790 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 ZNF292O60281 2723 aa5.38□□□□□ -1.55
LINC00550-201ENST00000629293 MBLAC1A4D2B0 266 aaPredicted RBP5.37□□□□□ -1.55
LINC00550-201ENST00000629293 GDF9O60383 454 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 FBXO24O75426 580 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CALM1P0DP23 149 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CALM2P0DP24 149 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 CALM3P0DP25 149 aa5.37□□□□□ -1.55
LINC00550-201ENST00000629293 METAP2P50579 478 aaKnown RBP eCLIP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms