RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ANKMY2Q8IV38 441 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 N4BP2L2Q92802 583 aaPredicted RBP13.52□□□□□ -0.24
SCN8A-209ENST00000627620 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 LRRC7Q96NW7 1537 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 MED14O60244 1454 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 SLC18A3Q16572 532 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 RBBP7Q16576 425 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 TEDDM1Q5T9Z0 273 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 KDELC2Q7Z4H8 507 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 ZNF280CQ8ND82 737 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.24
SCN8A-209ENST00000627620 PGBD4Q96DM1 585 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 CENPKQ9BS16 269 aa13.52□□□□□ -0.24
SCN8A-209ENST00000627620 USP42Q9H9J4 1324 aaKnown RBP13.52□□□□□ -0.24
SCN8A-209ENST00000627620 ARHGEF40Q8TER5 1519 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 C19orf81C9J6K1 198 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 TBX3O15119 743 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 KCNN4O15554 427 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 ENTPD3O75355 529 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 MCF2P10911 925 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 FMO5P49326 533 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 DDIASQ8IXT1 998 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 RCOR2Q8IZ40 523 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SLC35G2Q8TBE7 412 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 WDR24Q96S15 920 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 ING2Q9H160 280 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 A0A1B0GTH6 734 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 DNAJC6O75061 913 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SEPT1Q8WYJ6 367 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 ZFATQ9P243 1243 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 ZNF70Q9UC06 446 aaPredicted RBP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 PRR12Q9ULL5 1215 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 TRAPPC3O43617 180 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 NR3C2P08235 984 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 RGS7P49802 495 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SESN2P58004 480 aaPredicted RBP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 SNRNP35Q16560 246 aaKnown RBP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 KIFC3Q9BVG8 833 aa13.52□□□□□ -0.25
SCN8A-209ENST00000627620 PRDM5Q9NQX1 630 aaPredicted RBP13.52□□□□□ -0.25
SCN8A-209ENST00000627620 RHOBTB3O94955 611 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 CAMTA2O94983 1202 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SRGNP10124 158 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 RARBP10826 455 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 CDC42EP1Q00587 391 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 NCOA4Q13772 614 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 ANO4Q32M45 955 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SLC26A7Q8TE54 656 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 CHP1Q99653 195 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 DYNC1LI2O43237 492 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 CHGBP05060 677 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 PDGFRAP16234 1089 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 AARSP49588 968 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 TMEM132DQ14C87 1099 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 C16orf86Q6ZW13 317 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 TADA2BQ86TJ2 420 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SH3TC2Q8TF17 1288 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 FAM161BQ96MY7 647 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SNX12Q9UMY4 172 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 IQGAP3Q86VI3 1631 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 TARSL2A2RTX5 802 aaKnown RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 MYBP10242 640 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 NAA30Q147X3 362 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 STILQ15468 1287 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 ASAP3Q8TDY4 903 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 LZICQ8WZA0 190 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SENP7Q9BQF6 1050 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 CYP4F11Q9HBI6 524 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 UVRAGQ9P2Y5 699 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 MYMKA6NI61 221 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 ZNF189O75820 626 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 MYO1DO94832 1006 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 STAT4Q14765 748 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 HHIPL2Q6UWX4 724 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 AGR3Q8TD06 166 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 RAET1EQ8TD07 263 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 CASS4Q9NQ75 786 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 STOML1Q9UBI4 398 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 ZNF185O15231 689 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 UCHL3P15374 230 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 KCNA2P16389 499 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 GALCP54803 685 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 EMC2Q15006 297 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SGSM1Q2NKQ1 1148 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 SYCP2LQ5T4T6 812 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 THEMIS2Q5TEJ8 643 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 ABTB1Q969K4 478 aaPredicted RBP13.51□□□□□ -0.25
SCN8A-209ENST00000627620 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 AIPL1Q9NZN9 384 aa13.51□□□□□ -0.25
SCN8A-209ENST00000627620 KCND2Q9NZV8 630 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms