RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 SRGAP2CP0DJJ0 459 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 ITGA4P13612 1032 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 GDI1P31150 447 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 CXCL12P48061 93 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 RAB27AP51159 221 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 CCR3P51677 355 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 PFKPQ01813 784 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 PSMD5Q16401 504 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 ANO5Q75V66 913 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 NIPA1Q7RTP0 329 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 TMEM130Q8N3G9 435 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 HDAC7Q8WUI4 952 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 PGBD4Q96DM1 585 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 FAM126AQ9BYI3 521 aaPredicted RBP9.53□□□□□ -0.88
TCF4-258ENST00000627320 BRD9Q9H8M2 597 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 SNTG2Q9NY99 539 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 ADAM28Q9UKQ2 775 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 USP20Q9Y2K6 914 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 MRPS23Q9Y3D9 190 aaKnown RBP9.53□□□□□ -0.88
TCF4-258ENST00000627320 PTPRBP23467 1997 aa9.53□□□□□ -0.88
TCF4-258ENST00000627320 CCDC69A6NI79 296 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 C4orf47A7E2U8 309 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 TSPAN1O60635 241 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 MOSPD3O75425 235 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 ECI2O75521 394 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 EPN2O95208 641 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 IGHDP01880 384 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 SMARCA1P28370 1054 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 CDC27P30260 824 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 LIMK1P53667 647 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 SART3Q15020 963 aaKnown RBP9.52□□□□□ -0.89
TCF4-258ENST00000627320 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 PRSS36Q5K4E3 855 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 AXDND1Q5T1B0 1012 aaPredicted RBP9.52□□□□□ -0.89
TCF4-258ENST00000627320 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 LIN9Q5TKA1 542 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 SMAP1Q8IYB5 467 aaPredicted RBP9.52□□□□□ -0.89
TCF4-258ENST00000627320 ZFYVE19Q96K21 471 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 FAM167AQ96KS9 214 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 MAP3K14Q99558 947 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 EDEM2Q9BV94 578 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 ZNF334Q9HCZ1 680 aaPredicted RBP9.52□□□□□ -0.89
TCF4-258ENST00000627320 FNIP2Q9P278 1114 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 TCEAL9Q9UHQ7 104 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 BRPF3Q9ULD4 1205 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 ZFP37Q9Y6Q3 630 aaPredicted RBP9.52□□□□□ -0.89
TCF4-258ENST00000627320 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
TCF4-258ENST00000627320 CNTNAP2Q9UHC6 1331 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 PI4KAP42356 2102 aa9.52□□□□□ -0.89
TCF4-258ENST00000627320 HELZP42694 1942 aaKnown RBP9.51□□□□□ -0.89
TCF4-258ENST00000627320 ANTXRLA6NF34 631 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 WDR64B1ANS9 1081 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 PATE3B3GLJ2 98 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 ARNTLO00327 626 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 ZBTB39O15060 712 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 NCAM2O15394 837 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 MAFO75444 373 aaPredicted RBP9.51□□□□□ -0.89
TCF4-258ENST00000627320 PRB1P04280 392 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 CYP3A4P08684 503 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 ZNF806P0C7X5 589 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 SKIP12755 728 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 OR1D2P34982 312 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 PTGDRQ13258 359 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 RNF43Q68DV7 783 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 NAIF1Q69YI7 327 aaPredicted RBP9.51□□□□□ -0.89
TCF4-258ENST00000627320 ZNF410Q86VK4 478 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 LONP2Q86WA8 852 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 MAP4K3Q8IVH8 894 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 FANCBQ8NB91 859 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 EXOC6Q8TAG9 804 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 PRPF31Q8WWY3 499 aaKnown RBP9.51□□□□□ -0.89
TCF4-258ENST00000627320 CRELD1Q96HD1 420 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 NRBP2Q9NSY0 501 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 TBC1D22BQ9NU19 505 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 COL4A3BPQ9Y5P4 624 aa9.51□□□□□ -0.89
TCF4-258ENST00000627320 RBM8AQ9Y5S9 174 aaKnown RBP9.51□□□□□ -0.89
TCF4-258ENST00000627320 PCNX2A6NKB5 2137 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 EML1O00423 815 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 PTGESO14684 152 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 SEC24AO95486 1093 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 NPTXRO95502 500 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 TDP2O95551 362 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 HNRNPA1P09651 372 aaKnown RBP eCLIP9.5□□□□□ -0.89
TCF4-258ENST00000627320 MPLP40238 635 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 RAP1GAPP47736 663 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 NRLP54845 237 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 AP3B2Q13367 1082 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 PON2Q15165 354 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 AMHR2Q16671 573 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 COL28A1Q2UY09 1125 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 STXBP5Q5T5C0 1151 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 CASC1Q6TDU7 716 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 CHD1LQ86WJ1 897 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 DEFB124Q8NES8 71 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 DDX1Q92499 740 aaKnown RBP9.5□□□□□ -0.89
TCF4-258ENST00000627320 DNASE1L2Q92874 299 aa9.5□□□□□ -0.89
TCF4-258ENST00000627320 ELSPBP1Q96BH3 223 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms