RNA–Protein interactions for RNA: ENST00000626012.2

HDAC10-222, Transcript of histone deacetylase 10, human

TSL 5 BASIC

Gene HDAC10, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-222	ENST00000626012	CCDC13	Q8IYE1	715 aa		18.79	■□□□□ 0.6
HDAC10-222	ENST00000626012	EIF1AD	Q8N9N8	165 aa	Known RBP	18.79	■□□□□ 0.6
HDAC10-222	ENST00000626012	PSPC1	Q8WXF1	523 aa	Known RBP	18.79	■□□□□ 0.6
HDAC10-222	ENST00000626012	NT5C1B	Q96P26	610 aa		18.79	■□□□□ 0.6
HDAC10-222	ENST00000626012	MROH7	Q68CQ1	1323 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	NR3C2	P08235	984 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	SP2	Q02086	613 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	KRT17	Q04695	432 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	CYP24A1	Q07973	514 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	ADCY2	Q08462	1091 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	TRAF1	Q13077	416 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	CPLX4	Q7Z7G2	160 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	SUPT20H	Q8NEM7	779 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	MAPT	P10636	758 aa	Known RBP	18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	MUT	P22033	750 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	HMGCS2	P54868	508 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	AGBL2	Q5U5Z8	902 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	NIM1K	Q8IY84	436 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	XPO6	Q96QU8	1125 aa	Known RBP	18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	C11orf70	Q9BRQ4	267 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	TBK1	Q9UHD2	729 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	ZNRF3	Q9ULT6	936 aa		18.78	■□□□□ 0.6
HDAC10-222	ENST00000626012	VWA5A	O00534	786 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	RIPK2	O43353	540 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CP	P00450	1065 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CYP1A2	P05177	515 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	DRD4	P21917	467 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CHRNA3	P32297	505 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	SSR1	P43307	286 aa	Known RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	MTM1	Q13496	603 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	DHX34	Q14147	1143 aa	Known RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	SGO2	Q562F6	1265 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	SNRNP48	Q6IEG0	339 aa	Known RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CABS1	Q96KC9	395 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	NAP1L3	Q99457	506 aa	Predicted RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	TMEM8A	Q9HCN3	771 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	TBC1D22B	Q9NU19	505 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	ANKFY1	Q9P2R3	1169 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	SYNPO2	Q9UMS6	1093 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CD2AP	Q9Y5K6	639 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	COL2A1	P02458	1487 aa	Predicted RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	PI4K2B	G5E9Z4	385 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	WDR46	O15213	610 aa	Known RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	RGS16	O15492	202 aa	Predicted RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	TBC1D12	O60347	775 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	PLA2G6	O60733	806 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	STBD1	O95210	358 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	TNNI1	P19237	187 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CD58	P19256	250 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	SCP2	P22307	547 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	MAPK4	P31152	587 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	KCTD17	Q8N5Z5	321 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	ARFGAP2	Q8N6H7	521 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	MOV10L1	Q9BXT6	1211 aa	Known RBP	18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	CD248	Q9HCU0	757 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	ASIC3	Q9UHC3	531 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	PCYOX1	Q9UHG3	505 aa		18.77	■□□□□ 0.6
HDAC10-222	ENST00000626012	ATP8B3	O60423	1300 aa		18.77	■□□□□ 0.59
HDAC10-222	ENST00000626012	ZNF541	Q9H0D2	1346 aa		18.77	■□□□□ 0.59
HDAC10-222	ENST00000626012	MIF4GD	A9UHW6	222 aa	Known RBP	18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	DSG3	P32926	999 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	NLRX1	Q86UT6	975 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	MCF2L2	Q86YR7	1114 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	C12orf56	Q8IXR9	622 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	LRRC34	Q8IZ02	419 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	GLIS1	Q8NBF1	620 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	C1orf131	Q8NDD1	294 aa	Known RBP	18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	CDC42EP4	Q9H3Q1	356 aa	Known RBP	18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	GTF3C4	Q9UKN8	822 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	FAM187A	A6NFU0	413 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	PIAS1	O75925	651 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	GH1	P01241	217 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	SMTN	P53814	917 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	RWDD2B	P57060	319 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	TAS2R40	P59535	323 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	KYNU	Q16719	465 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	CCDC50	Q8IVM0	306 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	CCDC114	Q96M63	670 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	APOBEC3G	Q9HC16	384 aa	Known RBP	18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	PCDHA10	Q9Y5I2	948 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	BRCA2	P51587	3418 aa		18.76	■□□□□ 0.59
HDAC10-222	ENST00000626012	GPC3	P51654	580 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	HADHB	P55084	474 aa	Known RBP	18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	PRKCE	Q02156	737 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	ZNF394	Q53GI3	561 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	TDRD10	Q5VZ19	366 aa	Known RBP	18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	ACAD10	Q6JQN1	1059 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	DEFB132	Q7Z7B7	95 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	FAM83A	Q86UY5	434 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	RPS6KC1	Q96S38	1066 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	WNT8A	Q9H1J5	351 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	HAUS2	Q9NVX0	235 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	RASAL2	Q9UJF2	1139 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	WDR81	Q562E7	1941 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	CETP	P11597	493 aa		18.75	■□□□□ 0.59
HDAC10-222	ENST00000626012	GZMA	P12544	262 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms