RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 GARTP22102 1010 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 RPL9P32969 192 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 PDXDC1Q6P996 788 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 KRBA2Q6ZNG9 492 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 TMC7Q7Z402 723 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 GOLGA5Q8TBA6 731 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 POMGNT1Q8WZA1 660 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 STAMQ92783 540 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 HLA-CQ95604 372 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 PAGE5Q96GU1 130 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 RPF1Q9H9Y2 349 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 HCSTQ9UBK5 93 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 DNAJB4Q9UDY4 337 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 AGO2Q9UKV8 859 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 USP20Q9Y2K6 914 aa15.27■□□□□ 0.04
SNRPA1-216ENST00000626000 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 PTGESO14684 152 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 FSCN2O14926 492 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 ZNF202O95125 648 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 URODP06132 367 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 CTSAP10619 480 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 AFMP43652 599 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 FAM160A1Q05DH4 1040 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 EHHADHQ08426 723 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 COL19A1Q14993 1142 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 CCDC85BQ15834 202 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 PUS10Q3MIT2 529 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 TCEAL5Q5H9L2 206 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 ELMSAN1Q6PJG2 1045 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 PPFIBP1Q86W92 1011 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 NT5DC4Q86YG4 428 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 VPS52Q8N1B4 723 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 PABPC5Q96DU9 382 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 TIGD1Q96MW7 591 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 PPP1R10Q96QC0 940 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 ASB7Q9H672 318 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 TLE6Q9H808 572 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 GDPD2Q9HCC8 539 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 KIAA1586Q9HCI6 787 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 TBC1D7Q9P0N9 293 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 FAM50BQ9Y247 325 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 DERAQ9Y315 318 aa15.26■□□□□ 0.03
SNRPA1-216ENST00000626000 SMIM28A0A1B0GU29 152 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 RBAK-RBAKDNI3L0D1 243 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 C1RP00736 705 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 SOD2P04179 222 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 CYP3A5P20815 502 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 PBX3P40426 434 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 AFF1P51825 1210 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 OSTNP61366 133 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 CAMK1Q14012 370 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 KIAA1841Q6NSI8 718 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 DCLRE1AQ6PJP8 1040 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 EFHBQ8N7U6 833 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 CEP120Q8N960 986 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 MRPL43Q8N983 215 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 ZNF507Q8TCN5 953 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 ZBTB45Q96K62 511 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 HERC2P3Q9BVR0 1158 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 EMILIN2Q9BXX0 1053 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 ZBP1Q9H171 429 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 MRPL17Q9NRX2 175 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 RMND1Q9NWS8 449 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 DPP7Q9UHL4 492 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 ADAM28Q9UKQ2 775 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 UBQLN1Q9UMX0 589 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 PRG3Q9Y2Y8 225 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 COL6A3P12111 3177 aa15.25■□□□□ 0.03
SNRPA1-216ENST00000626000 TTC26A0AVF1 554 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 NT5C1B-RDH14C9J2C7 533 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 DLL1O00548 723 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 TADA2AO75478 443 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 IL18RAPO95256 599 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 ADRB2P07550 413 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 MYBP10242 640 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 DNAJB1P25685 340 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 CUL4BQ13620 913 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 SURF1Q15526 300 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 USP41Q3LFD5 358 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 ARMCX5Q6P1M9 558 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 EPM2AIP1Q7L775 607 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 ELOA2Q8IYF1 753 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 BLZF1Q9H2G9 400 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 MIOSQ9NXC5 875 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 CPSF3Q9UKF6 684 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 C2CD2Q9Y426 696 aa15.24■□□□□ 0.03
SNRPA1-216ENST00000626000 PDCD11Q14690 1871 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 ARHGEF37A1IGU5 675 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 FAM189A1O60320 539 aa15.23■□□□□ 0.03
SNRPA1-216ENST00000626000 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms