RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 OSTNP61366 133 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 DHX8Q14562 1220 aaKnown RBP11.88□□□□□ -0.51
SSBP4-215ENST00000625926 PTPN21Q16825 1174 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 ARSHQ5FYA8 562 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 GLRA4Q5JXX5 417 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 FAM171A1Q5VUB5 890 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 MPZL3Q6UWV2 235 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 CYP26C1Q6V0L0 522 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 CEP57Q86XR8 500 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 PALB2Q86YC2 1186 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 CEP120Q8N960 986 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 TMEM161BQ8NDZ6 487 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 CMASQ8NFW8 434 aaPredicted RBP11.88□□□□□ -0.51
SSBP4-215ENST00000625926 HASPINQ8TF76 798 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 MFSD14AQ96MC6 490 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 UROC1Q96N76 676 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 PPP1R10Q96QC0 940 aaKnown RBP11.88□□□□□ -0.51
SSBP4-215ENST00000625926 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 SLC38A7Q9NVC3 462 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 ODF2LQ9ULJ1 636 aa11.88□□□□□ -0.51
SSBP4-215ENST00000625926 CCDC195A0A1B0GUA6 201 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 TGM5O43548 720 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 TRAPPC3O43617 180 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 B3GAT3O94766 335 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 SPATA31D3P0C874 917 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 RPL17P18621 184 aaKnown RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 PLCG1P19174 1290 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 SCP2P22307 547 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 DDIT3P35638 169 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 CLCNKBP51801 687 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 GRIN1Q05586 938 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 RTP2Q5QGT7 225 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 LILRA6Q6PI73 481 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 PRSS55Q6UWB4 352 aaPredicted RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 ALKAL1Q6UXT8 129 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 ZPBP2Q6X784 338 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 SPATA31D4Q6ZUB0 917 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 HFE2Q6ZVN8 426 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 OTOP3Q7RTS5 596 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 BMP8AQ7Z5Y6 402 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 GPBP1Q86WP2 473 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 ZDHHC14Q8IZN3 488 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 TDRD5Q8NAT2 981 aaKnown RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 LNX1Q8TBB1 728 aaPredicted RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 PIK3R5Q8WYR1 880 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 RAD54LQ92698 747 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
SSBP4-215ENST00000625926 REEP2Q9BRK0 252 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 CCSER1Q9C0I3 900 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 BLOC1S4Q9NUP1 217 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 CLIC4Q9Y696 253 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 KIAA1671Q9BY89 1806 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 LOXHD1Q8IVV2 1947 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 PLXNA4Q9HCM2 1894 aa11.87□□□□□ -0.51
SSBP4-215ENST00000625926 TMEM221A6NGB7 291 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 TMEM189-UBE2V1I3L0A0 370 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 M0R296 226 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 ABLIM1O14639 778 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 CLDN3O15551 220 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 FAM13AO94988 1023 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 MYBP10242 640 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 HARSP12081 509 aaKnown RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 KCNE1P15382 129 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 NCKAP1LP55160 1127 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 RESTQ13127 1097 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 MCM6Q14566 821 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 PTPAQ15257 358 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 UPP1Q16831 310 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 CCDC149Q6ZUS6 474 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 HAUS6Q7Z4H7 955 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 GLYCTKQ8IVS8 523 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 MYCT1Q8N699 235 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 KREMEN2Q8NCW0 462 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 LRRC15Q8TF66 581 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 LARP4BQ92615 738 aaKnown RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 KCNN1Q92952 543 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 PBXIP1Q96AQ6 731 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 ACSF2Q96CM8 615 aaPredicted RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 ZBTB45Q96K62 511 aaPredicted RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 CLSTN3Q9BQT9 956 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 ANKFY1Q9P2R3 1169 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 CCDC39Q9UFE4 941 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 LIMD1Q9UGP4 676 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 SORCS3Q9UPU3 1222 aa11.86□□□□□ -0.51
SSBP4-215ENST00000625926 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
SSBP4-215ENST00000625926 WDFY4Q6ZS81 3184 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms