RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 MSH4O15457 936 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 BUB1O43683 1085 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 LARGE1O95461 756 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 U2AF2P26368 475 aaKnown RBP eCLIP12.47□□□□□ -0.419e-11■■■□□ 16.2
CHD2-205ENST00000625662 GNL1P36915 607 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 PPP6R3Q5H9R7 873 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 PLA2G4FQ68DD2 849 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 SMYD4Q8IYR2 804 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 PARP4Q9UKK3 1724 aaKnown RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 PPP1R12AO14974 1030 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 B3GAT3O94766 335 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 DDX5P17844 614 aaKnown RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 OXCT1P55809 520 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 EDRF1Q3B7T1 1238 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 FAM102AQ5T9C2 384 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 GRAMD1CQ8IYS0 662 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 TLK1Q9UKI8 766 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 TACC3Q9Y6A5 838 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 ZW10O43264 779 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 ECEL1O95672 775 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 MAP2K2P36507 400 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 AVPR1AP37288 418 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 KLC3Q6P597 504 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 HSPH1Q92598 858 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 RAB3IPQ96QF0 476 aaPredicted RBP12.47□□□□□ -0.41
CHD2-205ENST00000625662 FAM114A2Q9NRY5 505 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 RAB23Q9ULC3 237 aa12.47□□□□□ -0.41
CHD2-205ENST00000625662 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 SOCS7O14512 581 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 INHBAP08476 426 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 ARL4DP49703 201 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 FLT3LGP49771 235 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 EIF2B5Q13144 721 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 CCDC6Q16204 474 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 SNRNP35Q16560 246 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 STOX1Q6ZVD7 989 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 ATRIPQ8WXE1 791 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 UROC1Q96N76 676 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 RANBP17Q9H2T7 1088 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.46□□□□□ -0.411e-8■■■■■ 30.1
CHD2-205ENST00000625662 DBR1Q9UK59 544 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 CAPN2P17655 700 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 CASP14P31944 242 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 TROAPQ12815 778 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 ZBTB17Q13105 803 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 ALKBH5Q6P6C2 394 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 CSGALNACT1Q8TDX6 532 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 MAGOHBQ96A72 148 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 NIF3L1Q9GZT8 377 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 CATSPERBQ9H7T0 1116 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 NMRK2Q9NPI5 230 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 RRAGDQ9NQL2 400 aaPredicted RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 PARVAQ9NVD7 372 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 FAM198AQ9UFP1 575 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 BCAP29Q9UHQ4 241 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 MCF2P10911 925 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 RPAINQ86UA6 219 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 SCFD1Q8WVM8 642 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.41
CHD2-205ENST00000625662 REEP2Q9BRK0 252 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 DPP3Q9NY33 737 aa12.46□□□□□ -0.41
CHD2-205ENST00000625662 MRC1P22897 1456 aa12.46□□□□□ -0.42
CHD2-205ENST00000625662 ADCY6O43306 1168 aa12.46□□□□□ -0.42
CHD2-205ENST00000625662 MX2P20592 715 aa12.46□□□□□ -0.42
CHD2-205ENST00000625662 ZNF280AP59817 542 aaPredicted RBP12.46□□□□□ -0.42
CHD2-205ENST00000625662 TRIM42Q8IWZ5 723 aa12.46□□□□□ -0.42
CHD2-205ENST00000625662 ENGASEQ8NFI3 743 aa12.46□□□□□ -0.42
CHD2-205ENST00000625662 NFIBO00712 420 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 PLA2G6O60733 806 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 INSRRP14616 1297 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
CHD2-205ENST00000625662 ETFBP38117 255 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 STARD3Q14849 445 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 RAPH1Q70E73 1250 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 APBB2Q92870 758 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 HPDLQ96IR7 371 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 SENP7Q9BQF6 1050 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 C2CD2LO14523 706 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 MAP3K13O43283 966 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 NME3Q13232 169 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 PPM1LQ5SGD2 360 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 PDCD6IPQ8WUM4 868 aaKnown RBP12.45□□□□□ -0.42
CHD2-205ENST00000625662 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 DCUN1D1Q96GG9 259 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 HINFPQ9BQA5 517 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 PGRMC1O00264 195 aaKnown RBP12.45□□□□□ -0.42
CHD2-205ENST00000625662 DTNBO60941 627 aa12.45□□□□□ -0.42
CHD2-205ENST00000625662 LCP1P13796 627 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms