RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 USP20Q9Y2K6 914 aa15.96■□□□□ 0.15
TUBB3-215ENST00000625617 GDAQ9Y2T3 454 aa15.96■□□□□ 0.15
TUBB3-215ENST00000625617 PTPRZ1P23471 2315 aaPredicted RBP15.96■□□□□ 0.15
TUBB3-215ENST00000625617 CFAP54Q96N23 3096 aa15.96■□□□□ 0.14
TUBB3-215ENST00000625617 CCL16O15467 120 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 XYLBO75191 536 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 NAB2Q15742 525 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 EEF1DP3Q658K8 133 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 PHLDB3Q6NSJ2 640 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 DCLRE1AQ6PJP8 1040 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 ST13P5Q8NFI4 369 aaPredicted RBP15.95■□□□□ 0.14
TUBB3-215ENST00000625617 SLC7A14Q8TBB6 771 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 C8orf76Q96K31 380 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 IFT74Q96LB3 600 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 POLIQ9UNA4 740 aa15.95■□□□□ 0.14
TUBB3-215ENST00000625617 TDRD15B5MCY1 1934 aaKnown RBP15.94■□□□□ 0.14
TUBB3-215ENST00000625617 ADAM12O43184 909 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 EDN1P05305 212 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 MUTP22033 750 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 EFNA5P52803 228 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 NTHL1P78549 312 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 ZNF174Q15697 407 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 GLRA4Q5JXX5 417 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 SPECC1Q5M775 1068 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 MTSS1LQ765P7 747 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 APBB1IPQ7Z5R6 666 aaPredicted RBP15.94■□□□□ 0.14
TUBB3-215ENST00000625617 KIFAP3Q92845 792 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 CXCL16Q9H2A7 254 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 SIT1Q9Y3P8 196 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 MYO15AQ9UKN7 3530 aa15.94■□□□□ 0.14
TUBB3-215ENST00000625617 TMEM189-UBE2V1I3L0A0 370 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 B3GAT3O94766 335 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 DCNP07585 359 aaKnown RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 POU2F2P09086 479 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 CCT6AP40227 531 aaKnown RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 RBM25P49756 843 aaKnown RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 FOXK2Q01167 660 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 GNL2Q13823 731 aaKnown RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 RAB33AQ14088 237 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 TTC38Q5R3I4 469 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 ATF7IP2Q5U623 682 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 PARM1Q6UWI2 310 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 PJA1Q8NG27 643 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 KCNG4Q8TDN1 519 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 FGF13Q92913 245 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 FGF14Q92915 247 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 SHDQ96IW2 340 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 BHMT2Q9H2M3 363 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 FOXP1Q9H334 677 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 SEMA4AQ9H3S1 761 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 DAXXQ9UER7 740 aaPredicted RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 RIF1Q5UIP0 2472 aaKnown RBP15.93■□□□□ 0.14
TUBB3-215ENST00000625617 FAM186AA6NE01 2351 aa15.93■□□□□ 0.14
TUBB3-215ENST00000625617 FGFR3P22607 806 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 OR1D2P34982 312 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 AXDND1Q5T1B0 1012 aaPredicted RBP15.92■□□□□ 0.14
TUBB3-215ENST00000625617 ZC3H14Q6PJT7 736 aaKnown RBP15.92■□□□□ 0.14
TUBB3-215ENST00000625617 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 UROC1Q96N76 676 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 PPP1R10Q96QC0 940 aaKnown RBP15.92■□□□□ 0.14
TUBB3-215ENST00000625617 FOXQ1Q9C009 403 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 R4GN57 208 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 PHLPP2Q6ZVD8 1323 aa15.92■□□□□ 0.14
TUBB3-215ENST00000625617 TRAPPC3O43617 180 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 LMNAP02545 664 aaKnown RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 TKTP29401 623 aaKnown RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 TRAPPC10P48553 1259 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 CLCNKBP51801 687 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 GPC5P78333 572 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 ZNF568Q3ZCX4 644 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 PABPC1LQ4VXU2 614 aaKnown RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 NT5DC1Q5TFE4 455 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 ANKS3Q6ZW76 656 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 NPAS3Q8IXF0 933 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 ITFG1Q8TB96 612 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 RPP25Q9BUL9 199 aaKnown RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 CCDC94Q9BW85 323 aaPredicted RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 GOLGA2P5Q9HBQ8 144 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 TOPORSQ9NS56 1045 aaPredicted RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 DLGAP2Q9P1A6 1054 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 NOL7Q9UMY1 257 aaKnown RBP15.91■□□□□ 0.14
TUBB3-215ENST00000625617 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 CDY1Q9Y6F8 540 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 GVINP1Q7Z2Y8 2422 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 DOCK8Q8NF50 2099 aa15.91■□□□□ 0.14
TUBB3-215ENST00000625617 YARSP54577 528 aaKnown RBP15.9■□□□□ 0.14
TUBB3-215ENST00000625617 STARD6P59095 220 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
TUBB3-215ENST00000625617 ECM1Q16610 540 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 UPP1Q16831 310 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 RTL10Q7L3V2 364 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 C1orf210Q8IVY1 113 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 FBXO18Q8NFZ0 1043 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 SNX29Q8TEQ0 813 aa15.9■□□□□ 0.14
TUBB3-215ENST00000625617 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms