RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 GLRA2P23416 452 aa16.27■□□□□ 0.2
PNKP-218ENST00000625299 TARSP26639 723 aaKnown RBP16.27■□□□□ 0.2
PNKP-218ENST00000625299 HOXA9P31269 272 aa16.27■□□□□ 0.2
PNKP-218ENST00000625299 ARL2P36404 184 aa16.27■□□□□ 0.2
PNKP-218ENST00000625299 PABPC1LQ4VXU2 614 aaKnown RBP16.27■□□□□ 0.2
PNKP-218ENST00000625299 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.2
PNKP-218ENST00000625299 RUFY3Q7L099 469 aa16.27■□□□□ 0.2
PNKP-218ENST00000625299 MAEAQ7L5Y9 396 aa16.27■□□□□ 0.2
PNKP-218ENST00000625299 NPAS3Q8IXF0 933 aa16.27■□□□□ 0.2
PNKP-218ENST00000625299 GPR161Q8N6U8 529 aaKnown RBP16.27■□□□□ 0.2
PNKP-218ENST00000625299 NAP1L4Q99733 375 aaKnown RBP16.27■□□□□ 0.2
PNKP-218ENST00000625299 EIF2AK1Q9BQI3 630 aaKnown RBP16.27■□□□□ 0.2
PNKP-218ENST00000625299 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 A0A1B0GUA9 196 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 USO1O60763 962 aaKnown RBP16.26■□□□□ 0.19
PNKP-218ENST00000625299 SLITRK3O94933 977 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 MAGEA9P43362 315 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 LMNB2Q03252 620 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 SPIRE1Q08AE8 756 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 RSPO2Q6UXX9 243 aaPredicted RBP16.26■□□□□ 0.19
PNKP-218ENST00000625299 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
PNKP-218ENST00000625299 OXER1Q8TDS5 423 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 MCRS1Q96EZ8 462 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 HEBP1Q9NRV9 189 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 GJB4Q9NTQ9 266 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 SNTG2Q9NY99 539 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 MRPS23Q9Y3D9 190 aaKnown RBP16.26■□□□□ 0.19
PNKP-218ENST00000625299 ACACBO00763 2458 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 NOTCH4Q99466 2003 aa16.26■□□□□ 0.19
PNKP-218ENST00000625299 A0A087WWV3 80 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 DCDC2BA2VCK2 349 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 PTGESO14684 152 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 NCAM2O15394 837 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 DTNBO60941 627 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 THP07101 528 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 OR1D2P34982 312 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 PDXDC1Q6P996 788 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 ZNF852Q6ZMS4 543 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 ZBTB44Q8NCP5 570 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 BORCS6Q96GS4 357 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 CXCL16Q9H2A7 254 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 GPRC5CQ9NQ84 441 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 DNMT3BQ9UBC3 853 aaKnown RBP16.25■□□□□ 0.19
PNKP-218ENST00000625299 GMEB2Q9UKD1 530 aa16.25■□□□□ 0.19
PNKP-218ENST00000625299 FAM205CA6NFA0 338 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 PRR5-ARHGAP8B1AHC4 643 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 RECQL4O94761 1208 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 XBP1P17861 261 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 LIG1P18858 919 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 RARRES1P49788 294 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 ARHGAP8P85298 464 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
PNKP-218ENST00000625299 LPAL2Q16609 132 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
PNKP-218ENST00000625299 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 PIGOQ8TEQ8 1089 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 ZNF274Q96GC6 653 aaPredicted RBP16.24■□□□□ 0.19
PNKP-218ENST00000625299 PLA2G2FQ9BZM2 168 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 ANKEF1Q9NU02 776 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 PRMT7Q9NVM4 692 aaPredicted RBP16.24■□□□□ 0.19
PNKP-218ENST00000625299 KCNH3Q9ULD8 1083 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 NDRG2Q9UN36 371 aaKnown RBP16.24■□□□□ 0.19
PNKP-218ENST00000625299 MRPS17Q9Y2R5 130 aaKnown RBP16.24■□□□□ 0.19
PNKP-218ENST00000625299 CYP46A1Q9Y6A2 500 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 CDY1Q9Y6F8 540 aa16.24■□□□□ 0.19
PNKP-218ENST00000625299 N4BP3O15049 544 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 LILRB5O75023 590 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 ECI2O75521 394 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 MTAPQ13126 283 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 RAB33AQ14088 237 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 GRM2Q14416 872 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
PNKP-218ENST00000625299 NOSTRINQ8IVI9 506 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 CLDN23Q96B33 292 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 NELL2Q99435 816 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 PDZD7Q9H5P4 517 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 PRMT8Q9NR22 394 aaPredicted RBP16.23■□□□□ 0.19
PNKP-218ENST00000625299 RAB23Q9ULC3 237 aa16.23■□□□□ 0.19
PNKP-218ENST00000625299 KMT2BQ9UMN6 2715 aaPredicted RBP16.23■□□□□ 0.19
PNKP-218ENST00000625299 TTLL13PA6NNM8 815 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 TBC1D4O60343 1298 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 CDKL5O76039 1030 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 REC8O95072 547 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 LYPLA2O95372 231 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 RHOP08100 348 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 POU2F2P09086 479 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 CEBPBP17676 345 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 RPS9P46781 194 aaKnown RBP16.22■□□□□ 0.19
PNKP-218ENST00000625299 ADCY1Q08828 1119 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 PRPF4BQ13523 1007 aaKnown RBP16.22■□□□□ 0.19
PNKP-218ENST00000625299 CALCRLQ16602 461 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 SLC5A9Q2M3M2 681 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 GLRA4Q5JXX5 417 aa16.22■□□□□ 0.19
PNKP-218ENST00000625299 TANGO2Q6ICL3 276 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms