RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 CGRRF1Q99675 332 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 ADPGKQ9BRR6 497 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 FAM49AQ9H0Q0 323 aaPredicted RBP12.75□□□□□ -0.37
LINC00963-220ENST00000625171 UNC93B1Q9H1C4 597 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 AGPAT5Q9NUQ2 364 aa12.75□□□□□ -0.37
LINC00963-220ENST00000625171 RBAKQ9NYW8 714 aaPredicted RBP12.75□□□□□ -0.37
LINC00963-220ENST00000625171 A0A0U1RQG5 324 aaPredicted RBP12.74□□□□□ -0.37
LINC00963-220ENST00000625171 M0QZ92 97 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ANXA13P27216 316 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 BMP8BP34820 402 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 GRM5P41594 1212 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ACOT2P49753 483 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 KLK7P49862 253 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 MYL7Q01449 175 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 LRMPQ12912 555 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 PTGISQ16647 500 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF568Q3ZCX4 644 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 EEF1DP3Q658K8 133 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 WDR59Q6PJI9 974 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ENOSF1Q7L5Y1 443 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
LINC00963-220ENST00000625171 STK33Q9BYT3 514 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 SENP6Q9GZR1 1112 aaPredicted RBP12.74□□□□□ -0.37
LINC00963-220ENST00000625171 CRISPLD2Q9H0B8 497 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 FAM207AQ9NSI2 230 aaPredicted RBP12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
LINC00963-220ENST00000625171 GCNT4Q9P109 453 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 APEX2Q9UBZ4 518 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 DERAQ9Y315 318 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 TRPV2Q9Y5S1 764 aa12.74□□□□□ -0.37
LINC00963-220ENST00000625171 BZW2Q9Y6E2 419 aaKnown RBP12.74□□□□□ -0.37
LINC00963-220ENST00000625171 A0A1W2PQ45 241 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-220ENST00000625171 A0A1W2PQY0 241 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 SSU72P8A0A1W2PR75 194 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 KBTBD13C9JR72 458 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 ARVCFO00192 962 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 SOX1O00570 391 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-220ENST00000625171 EPHB6O15197 1021 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 TRIM49P0CI25 452 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 TRIM49CP0CI26 452 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 GCLMP48507 274 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 JAM2P57087 298 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 PTPN21Q16825 1174 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 DUOXA2Q1HG44 320 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 XKR4Q5GH76 650 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 CATSPER4Q7RTX7 472 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 CPLX3Q8WVH0 158 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 TMEM40Q8WWA1 233 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-220ENST00000625171 SCLT1Q96NL6 688 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 OSMRQ99650 979 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 LSM14BQ9BX40 385 aaKnown RBP12.73□□□□□ -0.37
LINC00963-220ENST00000625171 FAM124BQ9H5Z6 455 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-220ENST00000625171 PDE11AQ9HCR9 933 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
LINC00963-220ENST00000625171 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
LINC00963-220ENST00000625171 GPR182O15218 404 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 CCP110O43303 1012 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 LCA5LO95447 670 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 CHRNA1P02708 482 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 STAG3L1P0CL83 205 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 PRKCIP41743 596 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 MATR3P43243 847 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 POLR2FP61218 127 aaKnown RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 GCNT1Q02742 428 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 ENOX2Q16206 610 aaKnown RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 ALKAL1Q6UXT8 129 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF662Q6ZS27 426 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 CACNA2D4Q7Z3S7 1137 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 TAF4BQ92750 862 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 CCDC127Q96BQ5 260 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 GDF15Q99988 308 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 INTS2Q9H0H0 1204 aaKnown RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 RPF1Q9H9Y2 349 aaKnown RBP12.72□□□□□ -0.37
LINC00963-220ENST00000625171 STARD7Q9NQZ5 370 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 SPTLC3Q9NUV7 552 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 CDY2AQ9Y6F7 541 aa12.72□□□□□ -0.37
LINC00963-220ENST00000625171 ZNF623O75123 536 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 GFPT2O94808 682 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
LINC00963-220ENST00000625171 CD4P01730 458 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 TUBB4AP04350 444 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 CCDC172P0C7W6 258 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 TNNI1P19237 187 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 TNFSF9P41273 254 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 CHMP4BP1P59074 171 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 SLC10A6Q3KNW5 377 aa12.71□□□□□ -0.37
LINC00963-220ENST00000625171 LRIT3Q3SXY7 679 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms