RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 RXFP1Q9HBX9 757 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
LINC00963-217ENST00000624009 BARX2Q9UMQ3 279 aaPredicted RBP13.63□□□□□ -0.23
LINC00963-217ENST00000624009 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
LINC00963-217ENST00000624009 DOCK8Q8NF50 2099 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 C2orf16Q68DN1 1984 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 ANK1P16157 1881 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 PLXNA3P51805 1871 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 CLDN3O15551 220 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 CSPG5O95196 566 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 PAPLNO95428 1278 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 KRT18P05783 430 aaKnown RBP13.62□□□□□ -0.23
LINC00963-217ENST00000624009 ADH1AP07327 375 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 GAP43P17677 238 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 POU5F1Q01860 360 aaKnown RBP13.62□□□□□ -0.23
LINC00963-217ENST00000624009 CEBPZQ03701 1054 aaKnown RBP13.62□□□□□ -0.23
LINC00963-217ENST00000624009 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 SYCE2Q6PIF2 218 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 SV2BQ7L1I2 683 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 MYCT1Q8N699 235 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 SLC22A17Q8WUG5 538 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
LINC00963-217ENST00000624009 CLIC6Q96NY7 704 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 ACAP3Q96P50 834 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 NECAB3Q96P71 396 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-217ENST00000624009 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 TCHPQ9BT92 498 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 LRRC27Q9C0I9 530 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 S1PR5Q9H228 398 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 CNTN3Q9P232 1028 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 FNIP2Q9P278 1114 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 TBX20Q9UMR3 447 aa13.62□□□□□ -0.23
LINC00963-217ENST00000624009 DENND4AQ7Z401 1863 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 TECTAO75443 2155 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 NPHP3-ACAD11A0A0J9YXS1 232 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 SMIM28A0A1B0GU29 152 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 FRMD3A2A2Y4 597 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 CUTAO60888 179 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 CLCN4P51793 760 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 CBX2Q14781 532 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-217ENST00000624009 DCLRE1AQ6PJP8 1040 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 CYP26C1Q6V0L0 522 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 MAP4K3Q8IVH8 894 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 SNX27Q96L92 541 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
LINC00963-217ENST00000624009 PHF7Q9BWX1 381 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-217ENST00000624009 C1QTNF1Q9BXJ1 281 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 ADAM7Q9H2U9 754 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 MAGEF1Q9HAY2 307 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 OLFML3Q9NRN5 406 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 GDAQ9Y2T3 454 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 USP15Q9Y4E8 981 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-217ENST00000624009 MUC6Q6W4X9 2439 aa13.61□□□□□ -0.23
LINC00963-217ENST00000624009 ZNF318Q5VUA4 2279 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 K7ENM7 598 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
LINC00963-217ENST00000624009 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 TADA2AO75478 443 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 ADRB2P07550 413 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 CLTAP09496 248 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 CNPP09543 421 aaKnown RBP13.6□□□□□ -0.23
LINC00963-217ENST00000624009 ALADP13716 330 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
LINC00963-217ENST00000624009 STAT6P42226 847 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 ALCAMQ13740 583 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 UPP1Q16831 310 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 SPECC1Q5M775 1068 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 KIAA1841Q6NSI8 718 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 CES5AQ6NT32 575 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 CNNM4Q6P4Q7 775 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 ZNF720Q7Z2F6 126 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 CMASQ8NFW8 434 aaPredicted RBP13.6□□□□□ -0.23
LINC00963-217ENST00000624009 DDX12PQ92771 950 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 DNAJC19Q96DA6 116 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 DOCK6Q96HP0 2047 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 KLHL5Q96PQ7 755 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 GPR62Q9BZJ7 368 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 TNMDQ9H2S6 317 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 CACNA1HO95180 2353 aa13.6□□□□□ -0.23
LINC00963-217ENST00000624009 PIEZO1Q92508 2521 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 A0A0B4J269 797 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 LOC730098B7Z3J9 87 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 PPP1R37O75864 691 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 KLRC2P26717 231 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-217ENST00000624009 MTHFRP42898 656 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 LIG4P49917 911 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 AMPD3Q01432 767 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
LINC00963-217ENST00000624009 DHX8Q14562 1220 aaKnown RBP13.59□□□□□ -0.23
LINC00963-217ENST00000624009 CLUL1Q15846 466 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 E2F4Q16254 413 aa13.59□□□□□ -0.23
LINC00963-217ENST00000624009 AXDND1Q5T1B0 1012 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms