RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 Q7L0L9 218 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 ZNF598Q86UK7 904 aaKnown RBP21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 CBWD2Q8IUF1 395 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 ACAP3Q96P50 834 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 ELAC1Q9H777 363 aaKnown RBP21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 HES2Q9Y543 173 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 INSL6Q9Y581 213 aa21.58■■□□□ 1.04
PDLIM2-221ENST00000622702 BECN2A8MW95 431 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 GNA14O95837 355 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 EOMESO95936 686 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 TNFSF9P41273 254 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 HTRA4P83105 476 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 IRF2BP1Q8IU81 584 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 NPAS4Q8IUM7 802 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 BRSK2Q8IWQ3 736 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 TMEM192Q8IY95 271 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 PGBD4Q96DM1 585 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 BORCS6Q96GS4 357 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 FAM161BQ96MY7 647 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 YME1L1Q96TA2 773 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 TTYH1Q9H313 450 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 FANCLQ9NW38 375 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 SNTG2Q9NY99 539 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 LRFN2Q9ULH4 789 aa21.57■■□□□ 1.04
PDLIM2-221ENST00000622702 LCHNA4D1U4 455 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 ADRB2P07550 413 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 EPB41P11171 864 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 MARSP56192 900 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 OSTNP61366 133 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 ENOX2Q16206 610 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 CDKAL1Q5VV42 579 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 PPP2R2DQ66LE6 453 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 LUZP1Q86V48 1076 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 GAS2L3Q86XJ1 694 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 FAM186BQ8IYM0 893 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 CRIPAKQ8N1N5 446 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 DEFB123Q8N688 67 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 MFSD14AQ96MC6 490 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 HSD3B7Q9H2F3 369 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 RNF39Q9H2S5 420 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 RPF1Q9H9Y2 349 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 SAMSN1Q9NSI8 373 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 TMEM161AQ9NX61 479 aa21.56■■□□□ 1.04
PDLIM2-221ENST00000622702 TMEM265A0A087WTH1 108 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 RECQL4O94761 1208 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 ITGA4P13612 1032 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 ZNF18P17022 549 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 MCCD1P59942 119 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 FRMD5Q7Z6J6 570 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 FAM114A1Q8IWE2 563 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 RDH13Q8NBN7 331 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 ZNF576Q9H609 170 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 PLEKHA5Q9HAU0 1116 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 METTL14Q9HCE5 456 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 TOPORSQ9NS56 1045 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 RBAKQ9NYW8 714 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 CHD7Q9P2D1 2997 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 PCDHB7Q9Y5E2 793 aa21.55■■□□□ 1.04
PDLIM2-221ENST00000622702 CXCL8P10145 99 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 YARSP54577 528 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 ENPEPQ07075 957 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 CYP24A1Q07973 514 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 SLC10A6Q3KNW5 377 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 AGMOQ6ZNB7 445 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 INTS8Q75QN2 995 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 CNOT6LQ96LI5 555 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 APOL6Q9BWW8 343 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 UBN1Q9NPG3 1134 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 GIT1Q9Y2X7 761 aa21.54■■□□□ 1.04
PDLIM2-221ENST00000622702 TTC26A0AVF1 554 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 MEFVO15553 781 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 DGKIO75912 1065 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 ARHGEF15O94989 841 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 AKAP5P24588 427 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 PSMD6Q15008 389 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 XKR4Q5GH76 650 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 ALKAL1Q6UXT8 129 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 CD302Q8IX05 232 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 SNX27Q96L92 541 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 PARP2Q9UGN5 583 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 ARMCX3Q9UH62 379 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 CITO14578 2027 aa21.53■■□□□ 1.04
PDLIM2-221ENST00000622702 MEIS3P2A8K0S8 358 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 GOLGA6L19H0YKK7 550 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 IL18RAPO95256 599 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 EEF1GP26641 437 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 TAP1Q03518 808 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 SURF1Q15526 300 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 CCDC40Q4G0X9 1142 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 RNF169Q8NCN4 708 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 RNF214Q8ND24 703 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 SP7Q8TDD2 431 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 TMC2Q8TDI7 906 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 LPPQ93052 612 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 ASB7Q9H672 318 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 RSAD1Q9HA92 442 aa21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 MAGEC2Q9UBF1 373 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-221ENST00000622702 LINC01553A4QN01 128 aa21.52■■□□□ 1.03
PDLIM2-221ENST00000622702 INPPL1O15357 1258 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms