RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 ARSHQ5FYA8 562 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 FAM171A1Q5VUB5 890 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.63
LINC00649-219ENST00000622171 RSPO2Q6UXX9 243 aaPredicted RBP4.9□□□□□ -1.63
LINC00649-219ENST00000622171 C1orf186Q6ZWK4 172 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 DDX53Q86TM3 631 aaKnown RBP4.9□□□□□ -1.63
LINC00649-219ENST00000622171 SFR1Q86XK3 245 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 MYCT1Q8N699 235 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 MRPL43Q8N983 215 aaKnown RBP4.9□□□□□ -1.63
LINC00649-219ENST00000622171 GLIS3Q8NEA6 775 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 RAD54LQ92698 747 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 ELMO3Q96BJ8 720 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 FBXL18Q96ME1 805 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 PHOX2BQ99453 314 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 ADPGKQ9BRR6 497 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 C2orf40Q9H1Z8 148 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 S1PR5Q9H228 398 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 FZD8Q9H461 694 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 BLOC1S4Q9NUP1 217 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 LIMD1Q9UGP4 676 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 FBXO2Q9UK22 296 aaPredicted RBP4.9□□□□□ -1.63
LINC00649-219ENST00000622171 ADAM28Q9UKQ2 775 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 KIF3AQ9Y496 699 aa4.9□□□□□ -1.63
LINC00649-219ENST00000622171 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.9□□□□□ -1.63
LINC00649-219ENST00000622171 PTPRDP23468 1912 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ANAPC1Q9H1A4 1944 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 F5P12259 2224 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 CFAP54Q96N23 3096 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 GOLGA8IPA6NC78 632 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 MYMKA6NI61 221 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 C19orf67A6NJJ6 358 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 GOLGA8JA6NMD2 632 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ANKRD63C9JTQ0 380 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ABLIM1O14639 778 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 TGM5O43548 720 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 STX6O43752 255 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 EIF5BO60841 1220 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 TBCAO75347 108 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SOAT2O75908 522 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 BRD1O95696 1058 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 GLUD1P00367 558 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ALDH2P05091 517 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 THP07101 528 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 HSP90AA1P07900 732 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 NFICP08651 508 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 MAPTP10636 758 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SKIP12755 728 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 IDEP14735 1019 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 GJA1P17302 382 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 AXLP30530 894 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PRPHP41219 470 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 LIG4P49917 911 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 CASP5P51878 434 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 NCBP1Q09161 790 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 TUSC3Q13454 348 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 KCNC3Q14003 757 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 NOLC1Q14978 699 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PPP2R5AQ15172 486 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 STK38Q15208 465 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PTPAQ15257 358 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PSMD5Q16401 504 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 CCDC142Q17RM4 750 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 IER5LQ5T953 404 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SLC39A4Q6P5W5 647 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PPP4R3CPQ6ZMV5 832 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 IFNLR1Q8IU57 520 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 HSCBQ8IWL3 235 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 TDRD5Q8NAT2 981 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 KREMEN2Q8NCW0 462 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 TMEM161BQ8NDZ6 487 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SUSD6Q92537 303 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SMG7Q92540 1137 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 KIFAP3Q92845 792 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 CASP10Q92851 521 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SAAL1Q96ER3 474 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 CALML4Q96GE6 196 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 DDX27Q96GQ7 796 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SNX27Q96L92 541 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PGLYRP2Q96PD5 576 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 MYADMQ96S97 322 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 TMEM209Q96SK2 561 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ACO2Q99798 780 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PHF7Q9BWX1 381 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 MRPL4Q9BYD3 311 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 RAB34Q9BZG1 259 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PIDD1Q9HB75 910 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 NGRNQ9NPE2 291 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 MRPL17Q9NRX2 175 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ARHGAP28Q9P2N2 729 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 CA14Q9ULX7 337 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 LZTS1Q9Y250 596 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 GIT1Q9Y2X7 761 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PPME1Q9Y570 386 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 RIF1Q5UIP0 2472 aaKnown RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 GREB1Q4ZG55 1949 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
LINC00649-219ENST00000622171 SPTBN4Q9H254 2564 aa4.89□□□□□ -1.63
LINC00649-219ENST00000622171 PATJQ8NI35 1801 aa4.88□□□□□ -1.63
LINC00649-219ENST00000622171 PIEZO1Q92508 2521 aa4.88□□□□□ -1.63
LINC00649-219ENST00000622171 NUP210Q8TEM1 1887 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms