RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ICAM3P32942 547 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 COPB2P35606 906 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 GUCY1A3Q02108 690 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 MESDQ14696 234 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 PSMD6Q15008 389 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 PTGISQ16647 500 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 XKR3Q5GH77 459 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 TTC19Q6DKK2 380 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 ZNF677Q86XU0 584 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 UBLCP1Q8WVY7 318 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 PSPC1Q8WXF1 523 aaKnown RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 SLCO2A1Q92959 643 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 ZNF653Q96CK0 615 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 WRNIP1Q96S55 665 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 FAM129AQ9BZQ8 928 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 MAFBQ9Y5Q3 323 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 EBAG9O00559 213 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 TRIM66O15016 1216 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 SUPT20HL2P0C7V6 817 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 HMGCS2P54868 508 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 GNPTABQ3T906 1256 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 SUPT20HL1Q3ZLR7 823 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 SEL1L2Q5TEA6 688 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 MIS18BP1Q6P0N0 1132 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 SLC13A5Q86YT5 568 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 ZNF516Q92618 1163 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 DHX38Q92620 1227 aaKnown RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 TATDN2Q93075 761 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 IFT74Q96LB3 600 aa10.12□□□□□ -0.79
PDPN-212ENST00000621990 SEPT9Q9UHD8 586 aaPredicted RBP10.12□□□□□ -0.79
PDPN-212ENST00000621990 SSC5DA1L4H1 1573 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 PAEPP09466 180 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 MAGEA9P43362 315 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 BAG6P46379 1132 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 FNTAP49354 379 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 ZACNQ401N2 412 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 NOL9Q5SY16 702 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 TRMT1LQ7Z2T5 733 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 ADAT2Q7Z6V5 191 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 APOBEC3FQ8IUX4 373 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 TLCD1Q96CP7 247 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 CEP89Q96ST8 783 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 POLR3FQ9H1D9 316 aaPredicted RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 RASSF4Q9H2L5 321 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 PABPC3Q9H361 631 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 LRRC19Q9H756 370 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 PARP2Q9UGN5 583 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 CHORDC1Q9UHD1 332 aaPredicted RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 IGKV6D-21A0A0A0MT36 114 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 TMEM110-MUSTN1A8MSY1 372 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 ERLIN2O94905 339 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 MYBL1P10243 752 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 DLATP10515 647 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 ATP4AP20648 1035 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 RWDD2BP57060 319 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 EMC2Q15006 297 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 CCDC137Q6PK04 289 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 SPATS2Q86XZ4 545 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 C3orf20Q8ND61 904 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 MAGOHBQ96A72 148 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 PORCNQ9H237 461 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
PDPN-212ENST00000621990 C1orf112Q9NSG2 853 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 MTUS1Q9ULD2 1270 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 PCDHB2Q9Y5E7 798 aa10.11□□□□□ -0.79
PDPN-212ENST00000621990 PAPPA2Q9BXP8 1791 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 FAM170AA1A519 330 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 NDUFAB1O14561 156 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 FSCN2O14926 492 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 SPOPO43791 374 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 C4BPAP04003 597 aaKnown RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 COILP38432 576 aaPredicted RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 RPL21P46778 160 aaKnown RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 SP2Q02086 613 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 CYFIP1Q7L576 1253 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 CPNE8Q86YQ8 564 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 DNERQ8NFT8 737 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 FBXO25Q8TCJ0 367 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 KLRG1Q96E93 195 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 TRIM11Q96F44 468 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 NIFKQ9BYG3 293 aaKnown RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 TRIM31Q9BZY9 425 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.1□□□□□ -0.79
PDPN-212ENST00000621990 CNOT8Q9UFF9 292 aaKnown RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 GGA2Q9UJY4 613 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 ATP8A1Q9Y2Q0 1164 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 PTPRFP10586 1907 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 TCRBV7S2A1N4TA0A589 114 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 SPDYE16A6NNV3 312 aaPredicted RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 FAM107AO95990 144 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 RARAP10276 462 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 ACO1P21399 889 aaKnown RBP10.1□□□□□ -0.79
PDPN-212ENST00000621990 ARL2P36404 184 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 NAMPTP43490 491 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 PMS2P54278 862 aa10.1□□□□□ -0.79
PDPN-212ENST00000621990 CENPCQ03188 943 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms