RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 PSMC3IPQ9P2W1 217 aaPredicted RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 HEY2Q9UBP5 337 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 PCDHGA3Q9Y5H0 932 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 BTN3A3O00478 584 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 KRT6AP02538 564 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 KRT6BP04259 564 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 NFKBIAP25963 317 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 SERPINB5P36952 375 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 KRT6CP48668 564 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 CHI3L2Q15782 390 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 C11orf88Q6PI97 169 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 RNF19BQ6ZMZ0 732 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 FMR1NBQ8N0W7 255 aaPredicted RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 DPF2Q92785 391 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 CELF4Q9BZC1 486 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 PCDHA1Q9Y5I3 950 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 PSTPIP1O43586 416 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 GGPS1O95749 300 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 TSC22D1Q15714 1073 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 KDM7AQ6ZMT4 941 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 SUGP1Q8IWZ8 645 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 CEP95Q96GE4 821 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 KLF6Q99612 283 aaPredicted RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 ADGRA3Q8IWK6 1321 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 UBA6A0AVT1 1052 aaPredicted RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 GUCY1B2O75343 617 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 PARNO95453 639 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 RASGRF1Q13972 1273 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 KCTD1Q719H9 257 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 PCYOX1LQ8NBM8 494 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 QKIQ96PU8 341 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■□□ 17.6
CLTC-215ENST00000621829 CEP44Q9C0F1 390 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 METTL5Q9NRN9 209 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 TYW5A2RUC4 315 aaKnown RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 COX10Q12887 443 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 C19orf60Q96EN9 201 aa12.2□□□□□ -0.46
CLTC-215ENST00000621829 OTUB1Q96FW1 271 aaPredicted RBP12.2□□□□□ -0.46
CLTC-215ENST00000621829 FAM83BQ5T0W9 1011 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ARL6IP4Q66PJ3 421 aaKnown RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 LLGL2Q6P1M3 1020 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 UNC45BQ8IWX7 931 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 C9orf72Q96LT7 481 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 MBD2Q9UBB5 411 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 CDH16O75309 829 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 GUCA1CO95843 209 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 GSTT1P30711 240 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 SNX13Q9Y5W8 968 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 HSD17B3P37058 310 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 NUP62P37198 522 aaPredicted RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 MTM1Q13496 603 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 KLHL12Q53G59 568 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 SLC25A41Q8N5S1 370 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 USP44Q9H0E7 712 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 H2AFY2Q9P0M6 372 aaPredicted RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 ITGB1BP2Q9UKP3 347 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 PHTF1Q9UMS5 762 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 TAF5Q15542 800 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ARMC3Q5W041 872 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ZNF790Q6PG37 636 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 PRCCQ92733 491 aaPredicted RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 SLC10A4Q96EP9 437 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 AIPL1Q9NZN9 384 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 C15orf41Q9Y2V0 281 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 INSRP06213 1382 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ZNF862O60290 1169 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 UBOX5O94941 541 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 SLC29A2Q14542 456 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 NAALADL2Q58DX5 795 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 RBM17Q96I25 401 aaKnown RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ADGRA2Q96PE1 1338 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 PSMA4P25789 261 aaKnown RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 ARL13BQ3SXY8 428 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 FOXR1Q6PIV2 292 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 CYFIP1Q7L576 1253 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 SEPT1Q8WYJ6 367 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 RBM15Q96T37 977 aaKnown RBP eCLIP12.19□□□□□ -0.462e-7■■□□□ 14
CLTC-215ENST00000621829 FHDC1Q9C0D6 1143 aaPredicted RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 XPO7Q9UIA9 1087 aaKnown RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 SERPINB13Q9UIV8 391 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ATP9BO43861 1147 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 ATP12AP54707 1039 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 PDZK1Q5T2W1 519 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 SSH3Q8TE77 659 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 DDX56Q9NY93 547 aaKnown RBP12.19□□□□□ -0.46
CLTC-215ENST00000621829 ZNF212Q9UDV6 495 aa12.19□□□□□ -0.46
CLTC-215ENST00000621829 AKT3Q9Y243 479 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms