RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 LHFPL2Q6ZUX7 228 aa6.9□□□□□ -1.3
VPS29-212ENST00000621131 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
VPS29-212ENST00000621131 SLC35B2Q8TB61 432 aa6.9□□□□□ -1.3
VPS29-212ENST00000621131 FATE1Q969F0 183 aa6.9□□□□□ -1.3
VPS29-212ENST00000621131 AKIP1Q9NQ31 210 aa6.9□□□□□ -1.3
VPS29-212ENST00000621131 SYNJ2O15056 1496 aa6.9□□□□□ -1.31
VPS29-212ENST00000621131 GAGE12BA1L429 117 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 GRID2IPA4D2P6 1211 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 RNASET2O00584 256 aaKnown RBP6.89□□□□□ -1.31
VPS29-212ENST00000621131 ZNF185O15231 689 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 LPXNO60711 386 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 NCR1O76036 304 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 MGAT1P26572 445 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 CCT2P78371 535 aaKnown RBP6.89□□□□□ -1.31
VPS29-212ENST00000621131 FAPQ12884 760 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 FAM102AQ5T9C2 384 aaPredicted RBP6.89□□□□□ -1.31
VPS29-212ENST00000621131 KRT26Q7Z3Y9 468 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 GPR150Q8NGU9 434 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 TFAP2CQ92754 450 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 QRSL1Q9H0R6 528 aaKnown RBP6.89□□□□□ -1.31
VPS29-212ENST00000621131 IFT122Q9HBG6 1241 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 POGKQ9P215 609 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 ATRNL1Q5VV63 1379 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 GRIN2BQ13224 1484 aa6.89□□□□□ -1.31
VPS29-212ENST00000621131 MAGI1Q96QZ7 1491 aaPredicted RBP6.89□□□□□ -1.31
VPS29-212ENST00000621131 SNAPC4Q5SXM2 1469 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 ABCC10Q5T3U5 1492 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 VPS8Q8N3P4 1428 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 PJA2O43164 708 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 VIL1P09327 827 aaKnown RBP6.88□□□□□ -1.31
VPS29-212ENST00000621131 GPR3P46089 330 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 PDCD4Q53EL6 469 aaKnown RBP6.88□□□□□ -1.31
VPS29-212ENST00000621131 ZNF572Q7Z3I7 529 aaPredicted RBP6.88□□□□□ -1.31
VPS29-212ENST00000621131 TRMT2AQ8IZ69 625 aaKnown RBP6.88□□□□□ -1.31
VPS29-212ENST00000621131 RNF169Q8NCN4 708 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 OR7D4Q8NG98 312 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 BCO1Q9HAY6 547 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 PACSIN3Q9UKS6 424 aa6.88□□□□□ -1.31
VPS29-212ENST00000621131 ADAMTS12P58397 1594 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 EFCAB5A4FU69 1503 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 PNPLA7Q6ZV29 1317 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 DRGXA6NNA5 263 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 CXorf49A8MYA2 514 aaPredicted RBP6.87□□□□□ -1.31
VPS29-212ENST00000621131 MTHFD2P13995 350 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 PTPN7P35236 360 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 BMPR1AP36894 532 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 TMPRSS15P98073 1019 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 PPP3CAQ08209 521 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 ANO4Q32M45 955 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 BEAN1Q3B7T3 259 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 TOR2AQ5JU69 321 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 PLXDC1Q8IUK5 500 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 ZFP28Q8NHY6 868 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 ZG16BQ96DA0 208 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 NEU1Q99519 415 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 GREM2Q9H772 168 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 C14orf119Q9NWQ9 140 aa6.87□□□□□ -1.31
VPS29-212ENST00000621131 DIP2BQ9P265 1576 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 FHAD1B1AJZ9 1412 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 GPR39O43194 453 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 B3GALT2O43825 422 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 PRKD3O94806 890 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 NDUFA10O95299 355 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 ALOX15P16050 662 aaPredicted RBP6.86□□□□□ -1.31
VPS29-212ENST00000621131 SREBF1P36956 1147 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 ZEB1P37275 1124 aaPredicted RBP6.86□□□□□ -1.31
VPS29-212ENST00000621131 CLRN1P58418 232 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 NANOS3P60323 173 aaKnown RBP6.86□□□□□ -1.31
VPS29-212ENST00000621131 TAP1Q03518 808 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 CT47A1Q5JQC4 288 aaPredicted RBP6.86□□□□□ -1.31
VPS29-212ENST00000621131 HOXB13Q92826 284 aaPredicted RBP6.86□□□□□ -1.31
VPS29-212ENST00000621131 ACE2Q9BYF1 805 aaPredicted RBP6.86□□□□□ -1.31
VPS29-212ENST00000621131 WDR11Q9BZH6 1224 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 ANKFY1Q9P2R3 1169 aa6.86□□□□□ -1.31
VPS29-212ENST00000621131 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
VPS29-212ENST00000621131 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
VPS29-212ENST00000621131 SRSF2Q01130 221 aaKnown RBP6.85□□□□□ -1.31
VPS29-212ENST00000621131 MUM1L1Q5H9M0 696 aa6.85□□□□□ -1.31
VPS29-212ENST00000621131 WDR66Q8TBY9 1149 aa6.85□□□□□ -1.31
VPS29-212ENST00000621131 AHCYL2Q96HN2 611 aaKnown RBP6.85□□□□□ -1.31
VPS29-212ENST00000621131 RBM12Q9NTZ6 932 aaKnown RBP6.85□□□□□ -1.31
VPS29-212ENST00000621131 MAPKBP1O60336 1514 aa6.85□□□□□ -1.31
VPS29-212ENST00000621131 POLR2AP24928 1970 aaKnown RBP6.84□□□□□ -1.31
VPS29-212ENST00000621131 CLSTN1O94985 981 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 CPEP16870 476 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 ADRA1BP35368 520 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 MCAMP43121 646 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 CHN2P52757 468 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 SP140Q13342 867 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 GJC2Q5T442 439 aaPredicted RBP6.84□□□□□ -1.31
VPS29-212ENST00000621131 ATXN7L2Q5T6C5 722 aaPredicted RBP6.84□□□□□ -1.31
VPS29-212ENST00000621131 FAM180AQ6UWF9 173 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 DNAJC10Q8IXB1 793 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 CPEB3Q8NE35 698 aaKnown RBP6.84□□□□□ -1.31
VPS29-212ENST00000621131 FBXO18Q8NFZ0 1043 aa6.84□□□□□ -1.31
VPS29-212ENST00000621131 FAM126AQ9BYI3 521 aaPredicted RBP6.84□□□□□ -1.31
VPS29-212ENST00000621131 DMRT3Q9NQL9 472 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms