RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 TMEM117Q9H0C3 514 aa11.9□□□□□ -0.5
POLR2J3-221ENST00000621093 RPF1Q9H9Y2 349 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-221ENST00000621093 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-221ENST00000621093 CACNG4Q9UBN1 327 aa11.9□□□□□ -0.5
POLR2J3-221ENST00000621093 ATG2AQ2TAZ0 1938 aa11.9□□□□□ -0.51
POLR2J3-221ENST00000621093 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 TTC26A0AVF1 554 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 AKAP3O75969 853 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 DDHD2O94830 711 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 PPP1R2P41236 205 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 YARSP54577 528 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 SNRNP35Q16560 246 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 NFIL3Q16649 462 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 EDRF1Q3B7T1 1238 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 GLB1LQ6UWU2 654 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 ZNF280BQ86YH2 543 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 ABI1Q8IZP0 508 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 PLEKHO2Q8TD55 490 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 RAD9AQ99638 391 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 NKX2-4Q9H2Z4 354 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 UBN1Q9NPG3 1134 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 TBC1D13Q9NVG8 400 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 ANO10Q9NW15 660 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 RBAKQ9NYW8 714 aaPredicted RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 RWDD2AQ9UIY3 292 aa11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
POLR2J3-221ENST00000621093 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 SCN1AP35498 2009 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 SMIM28A0A1B0GU29 152 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 ZNF233A6NK53 670 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 KIAA0391O15091 583 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 INPPL1O15357 1258 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 HOXA2O43364 376 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 NFICP08651 508 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 GUCY2FP51841 1108 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 LRRC63Q05C16 580 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 CYP24A1Q07973 514 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 BTG3Q14201 252 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 NAB2Q15742 525 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 KYAT1Q16773 422 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 JADE1Q6IE81 842 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 EFCAB13Q8IY85 973 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 URGCPQ8TCY9 931 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 C18orf25Q96B23 403 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 RPS6KC1Q96S38 1066 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 CWH43Q9H720 699 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 NRDE2Q9H7Z3 1164 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 GOLGA2P5Q9HBQ8 144 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 CNTN3Q9P232 1028 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 DNAJB4Q9UDY4 337 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 INSL6Q9Y581 213 aa11.88□□□□□ -0.51
POLR2J3-221ENST00000621093 BICDL2A1A5D9 508 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 SOX1O00570 391 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 CETN3O15182 167 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 CA3P07451 260 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 LINC00271P0C7V0 271 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 CCDC192P0DO97 292 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 IGFBP6P24592 240 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 RPL13P26373 211 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 PBX3P40426 434 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 DLG4P78352 724 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 FKBP3Q00688 224 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 MYBPC2Q14324 1141 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 FIBCD1Q8N539 461 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 CSGALNACT2Q8N6G5 542 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 TMEM174Q8WUU8 243 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 MFSD14AQ96MC6 490 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 PPP1R10Q96QC0 940 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 PAAF1Q9BRP4 392 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 PLEKHA5Q9HAU0 1116 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 KIAA1586Q9HCI6 787 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 TUBGCP4Q9UGJ1 667 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
POLR2J3-221ENST00000621093 VWA8A3KMH1 1905 aa11.86□□□□□ -0.51
POLR2J3-221ENST00000621093 LINC01553A4QN01 128 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms