RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 APBB1IPQ7Z5R6 666 aaPredicted RBP18.83■□□□□ 0.6
HMGN3-203ENST00000620514 TMEM161BQ8NDZ6 487 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 CALML4Q96GE6 196 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 CCDC94Q9BW85 323 aaPredicted RBP18.83■□□□□ 0.6
HMGN3-203ENST00000620514 GOLGA2P5Q9HBQ8 144 aa18.83■□□□□ 0.6
HMGN3-203ENST00000620514 SMIM28A0A1B0GU29 152 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 TMEM221A6NGB7 291 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 M0R296 226 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 RFPL2O75678 378 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 MAPTP10636 758 aaKnown RBP18.82■□□□□ 0.6
HMGN3-203ENST00000620514 MCF2P10911 925 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 PLCG1P19174 1290 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 PDCP20941 246 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 SYT1P21579 422 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 RESTQ13127 1097 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 MPZL3Q6UWV2 235 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 CD300LGQ6UXG3 332 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 GPBP1Q86WP2 473 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 CEP57Q86XR8 500 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 GPR65Q8IYL9 337 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 TCHPQ9BT92 498 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 TTPALQ9BTX7 342 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.82■□□□□ 0.6
HMGN3-203ENST00000620514 KCND2Q9NZV8 630 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 FNIP2Q9P278 1114 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 TRIP11Q15643 1979 aa18.82■□□□□ 0.6
HMGN3-203ENST00000620514 MYH11P35749 1972 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 C2orf16Q68DN1 1984 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 CCDC195A0A1B0GUA6 201 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 MEFVO15553 781 aaPredicted RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 SLC26A4O43511 780 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 TGM5O43548 720 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 LONP1P36776 959 aaKnown RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 CLCNKBP51801 687 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 SMTNP53814 917 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 YARSP54577 528 aaKnown RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 SOX4Q06945 474 aaPredicted RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 STRN3Q13033 797 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 MCM6Q14566 821 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 PTPAQ15257 358 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 XKR4Q5GH76 650 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 SPECC1Q5M775 1068 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 LILRA6Q6PI73 481 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 ALKAL1Q6UXT8 129 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 USP49Q70CQ1 688 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 TDRD5Q8NAT2 981 aaKnown RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 CMASQ8NFW8 434 aaPredicted RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 LNX1Q8TBB1 728 aaPredicted RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 ZMAT2Q96NC0 199 aaKnown RBP18.81■□□□□ 0.6
HMGN3-203ENST00000620514 REEP2Q9BRK0 252 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 DENND4AQ7Z401 1863 aa18.81■□□□□ 0.6
HMGN3-203ENST00000620514 B3GAT3O94766 335 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 BRD1O95696 1058 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 ASGR2P07307 311 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 MARCKSP29966 332 aaPredicted RBP18.8■□□□□ 0.6
HMGN3-203ENST00000620514 SIGLEC14Q08ET2 396 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 PSMD5Q16401 504 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 SEZ6Q53EL9 994 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 C15orf39Q6ZRI6 1047 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 CCDC149Q6ZUS6 474 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 KREMEN2Q8NCW0 462 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 C3orf58Q8NDZ4 430 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 RASSF8Q8NHQ8 419 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 PIK3R5Q8WYR1 880 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 RAD54LQ92698 747 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 SNX27Q96L92 541 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 ACAP3Q96P50 834 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 CLSTN3Q9BQT9 956 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 SMOC2Q9H3U7 446 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 TOPORSQ9NS56 1045 aaPredicted RBP18.8■□□□□ 0.6
HMGN3-203ENST00000620514 ANKFY1Q9P2R3 1169 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 DAXXQ9UER7 740 aaPredicted RBP18.8■□□□□ 0.6
HMGN3-203ENST00000620514 LIMD1Q9UGP4 676 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 TRIOO75962 3097 aa18.8■□□□□ 0.6
HMGN3-203ENST00000620514 VWA8A3KMH1 1905 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 TMEM189-UBE2V1I3L0A0 370 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 ADAM12O43184 909 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 TOM1L1O75674 476 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 PLA2G5P39877 138 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 NCKAP1LP55160 1127 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 UPP1Q16831 310 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 ZDHHC14Q8IZN3 488 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 PBXIP1Q96AQ6 731 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 ZNF707Q96C28 371 aaPredicted RBP18.79■□□□□ 0.6
HMGN3-203ENST00000620514 FAM122AQ96E09 287 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 INTS4Q96HW7 963 aaKnown RBP18.79■□□□□ 0.6
HMGN3-203ENST00000620514 EPSTI1Q96J88 318 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 HAPLN2Q9GZV7 340 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 LARSQ9P2J5 1176 aaKnown RBP18.79■□□□□ 0.6
HMGN3-203ENST00000620514 KCNG1Q9UIX4 513 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 FBXO2Q9UK22 296 aaPredicted RBP18.79■□□□□ 0.6
HMGN3-203ENST00000620514 ODF2LQ9ULJ1 636 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
HMGN3-203ENST00000620514 I3L4J1 428 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 K7ELQ4 463 aaPredicted RBP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 FGFR3P22607 806 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 BRCC3P46736 316 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 CREMQ03060 361 aa18.78■□□□□ 0.6
HMGN3-203ENST00000620514 CEBPZQ03701 1054 aaKnown RBP18.78■□□□□ 0.6
HMGN3-203ENST00000620514 ELAVL2Q12926 359 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms