RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 SRGAP1Q7Z6B7 1085 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 KIAA0319LQ8IZA0 1049 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 TSC1Q92574 1164 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 KAT2BQ92831 832 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 KAT5Q92993 513 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 SALL4Q9UJQ4 1053 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 SAR1BQ9Y6B6 198 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 ZSWIM8A7E2V4 1837 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 PTPRJQ12913 1337 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 A0A0A6YYK5 440 aaPredicted RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 HAS3O00219 553 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 B4GALT5O43286 388 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 VTNP04004 478 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 ATP1A1P05023 1023 aaKnown RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 IQCF3P0C7M6 154 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 SMIM10L2AP0DMW4 78 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 SMIM10L2BP0DMW5 78 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 MCF2P10911 925 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 CTGFP29279 349 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 TNFSF9P41273 254 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 PIK3CAP42336 1068 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 NCBP1Q09161 790 aaKnown RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 MFSD10Q14728 455 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 GLYCTKQ8IVS8 523 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 TATDN2Q93075 761 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 ZNF668Q96K58 619 aaPredicted RBP16.51■□□□□ 0.23
PSMC3-213ENST00000619920 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 PACSIN1Q9BY11 444 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
PSMC3-213ENST00000619920 EVPLQ92817 2033 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 SMIM35A0A1B0GVV1 85 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 MBLAC1A4D2B0 266 aaPredicted RBP16.5■□□□□ 0.23
PSMC3-213ENST00000619920 IL18RAPO95256 599 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 VNN1O95497 513 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 AKR1A1P14550 325 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 USP8P40818 1118 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 NAP1L1P55209 391 aaKnown RBP16.5■□□□□ 0.23
PSMC3-213ENST00000619920 NOGQ13253 232 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 DUOXA2Q1HG44 320 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 SEZ6Q53EL9 994 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 EEF1DP3Q658K8 133 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 LRRN4CLQ8ND94 238 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 LMBR1Q8WVP7 490 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 NLRP7Q8WX94 980 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 ANKRD7Q92527 254 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 UBXN4Q92575 508 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
PSMC3-213ENST00000619920 CDT1Q9H211 546 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 TSKSQ9UJT2 592 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
PSMC3-213ENST00000619920 ENC1O14682 589 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 B4GALT4O60513 344 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 KPNA6O60684 536 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 PHACTR2O75167 634 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 PSMC4P43686 418 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 PSEN2P49810 448 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.23
PSMC3-213ENST00000619920 MFSD14CQ5VZR4 134 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 OR5B17Q8NGF7 314 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 EPS8L1Q8TE68 723 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 PI4K2AQ9BTU6 479 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
PSMC3-213ENST00000619920 NOCTQ9UK39 431 aaKnown RBP16.49■□□□□ 0.23
PSMC3-213ENST00000619920 CYP26A1O43174 497 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 BUB1O43683 1085 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 DUSP11O75319 330 aaKnown RBP16.48■□□□□ 0.23
PSMC3-213ENST00000619920 CLTAP09496 248 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 TMEM253P0C7T8 217 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
PSMC3-213ENST00000619920 GALCP54803 685 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 BPIFB4P59827 614 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
PSMC3-213ENST00000619920 NCOA4Q13772 614 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 CYP4F22Q6NT55 531 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 PAXIP1Q6ZW49 1069 aaPredicted RBP16.48■□□□□ 0.23
PSMC3-213ENST00000619920 THNSL1Q8IYQ7 743 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 PDZD7Q9H5P4 517 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
PSMC3-213ENST00000619920 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.235e-7■■■■■ 59.9
PSMC3-213ENST00000619920 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 SNX12Q9UMY4 172 aa16.48■□□□□ 0.23
PSMC3-213ENST00000619920 GPR25O00155 361 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 TOMM70O94826 608 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 SGPL1O95470 568 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 MYL3P08590 195 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 GZMAP12544 262 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 CYP11B1P15538 503 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 ARF4P18085 180 aaPredicted RBP16.47■□□□□ 0.23
PSMC3-213ENST00000619920 ADAM17P78536 824 aa16.47■□□□□ 0.23
PSMC3-213ENST00000619920 NAA30Q147X3 362 aaPredicted RBP16.47■□□□□ 0.23
PSMC3-213ENST00000619920 FSCN1Q16658 493 aaKnown RBP16.47■□□□□ 0.23
PSMC3-213ENST00000619920 RSRC2Q7L4I2 434 aaKnown RBP16.47■□□□□ 0.23
PSMC3-213ENST00000619920 NOP9Q86U38 636 aaKnown RBP16.47■□□□□ 0.23
PSMC3-213ENST00000619920 RPUSD2Q8IZ73 545 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms