RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 SUPT20HL2P0C7V6 817 aa10.61□□□□□ -0.71
CDH23-213ENST00000619887 STAT5BP51692 787 aa10.61□□□□□ -0.71
CDH23-213ENST00000619887 SF3A3Q12874 501 aaKnown RBP eCLIP10.61□□□□□ -0.71
CDH23-213ENST00000619887 SNX1Q13596 522 aa10.61□□□□□ -0.71
CDH23-213ENST00000619887 C11orf70Q9BRQ4 267 aa10.61□□□□□ -0.71
CDH23-213ENST00000619887 MYCP01106 439 aaPredicted RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 HLA-DRAP01903 254 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 OATP04181 439 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 IRAK1P51617 712 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 CYP24A1Q07973 514 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 NBPF12Q5TAG4 269 aaPredicted RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 MREGQ8N565 214 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 TRIM51Q9BSJ1 452 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 APOL6Q9BWW8 343 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 PPP1R37O75864 691 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 RNF8O76064 485 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 SGPL1O95470 568 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 KRT14P02533 472 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 KRT1P04264 644 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 CYP11B1P15538 503 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 JAM2P57087 298 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 UAP1Q16222 522 aaPredicted RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 VSIG10LQ86VR7 867 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 UHMK1Q8TAS1 419 aaKnown RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 SEPT1Q8WYJ6 367 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 KIFC3Q9BVG8 833 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 ST6GALNAC4Q9H4F1 302 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 IP6K2Q9UHH9 426 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 PRDM4Q9UKN5 801 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 DDX60LQ5H9U9 1706 aaKnown RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 SRGAP2CP0DJJ0 459 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 NAMPTP43490 491 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 FNTAP49354 379 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 SLC8A3P57103 927 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 PTENP60484 403 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 MAPK7Q13164 816 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 KDM7AQ6ZMT4 941 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 DEFB132Q7Z7B7 95 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 SLC20A1Q8WUM9 679 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 CRYGNQ8WXF5 182 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 RNF34Q969K3 372 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 RPF1Q9H9Y2 349 aaKnown RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 DMAC2Q9NW81 257 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 GGA3Q9NZ52 723 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 STRIP2Q9ULQ0 834 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 IFNB1P01574 187 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 MARK3P27448 753 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 HSD17B3P37058 310 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 TAP1Q03518 808 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 LNX1Q8TBB1 728 aaPredicted RBP10.6□□□□□ -0.71
CDH23-213ENST00000619887 PARD3BQ8TEW8 1205 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 TMEM143Q96AN5 459 aa10.6□□□□□ -0.71
CDH23-213ENST00000619887 GAS2O43903 313 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 TJP3O95049 919 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 MDH1P40925 334 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 MNAT1P51948 309 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 MXD4Q14582 209 aaPredicted RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 R3HDM1Q15032 1099 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 DUOXA2Q1HG44 320 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 SRLQ86TD4 932 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 SESTD1Q86VW0 696 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 ERICH1Q86X53 443 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 DDX42Q86XP3 938 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDH23-213ENST00000619887 ARHGEF19Q8IW93 802 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 SH2D3CQ8N5H7 860 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 DNERQ8NFT8 737 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 RSAD2Q8WXG1 361 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 ZKSCAN4Q969J2 545 aaPredicted RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 MAF1Q9H063 256 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 PARVAQ9NVD7 372 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 SALL4Q9UJQ4 1053 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 PHBP35232 272 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 ARL1P40616 181 aaPredicted RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 MAGEA9P43362 315 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 YARSP54577 528 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 NCKAP1LP55160 1127 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 MAGOHP61326 146 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 OSTNP61366 133 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 GCNT1Q02742 428 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 PPP3CAQ08209 521 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 ITGB3BPQ13352 177 aaPredicted RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 BYSLQ13895 437 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 SLC13A5Q86YT5 568 aaPredicted RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 CCDC63Q8NA47 563 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 CELF4Q9BZC1 486 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 SYF2O95926 243 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 MYBL2P10244 700 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 CD58P19256 250 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 STX2P32856 288 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 ACOT2P49753 483 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 RRP1BQ14684 758 aaKnown RBP10.59□□□□□ -0.71
CDH23-213ENST00000619887 ZNF699Q32M78 642 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 ZNF667Q5HYK9 610 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 KAZNQ674X7 775 aa10.59□□□□□ -0.71
CDH23-213ENST00000619887 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms