RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 HNRNPDLO14979 420 aaKnown RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 EIF3DO15371 548 aaKnown RBP eCLIP9.02□□□□□ -0.97
NEK3-209ENST00000618856 C1RP00736 705 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 SOD2P04179 222 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 THP07101 528 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 CLTAP09496 248 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 MYBP10242 640 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 KCNA1Q09470 495 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 COASYQ13057 564 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 CUL4BQ13620 913 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 DUSP6Q16828 381 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 BMT2Q1RMZ1 405 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 KIAA0319Q5VV43 1072 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 CRELD2Q6UXH1 353 aaPredicted RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 ADGRD2Q7Z7M1 963 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 EFHBQ8N7U6 833 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 GLIS3Q8NEA6 775 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 ENGASEQ8NFI3 743 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 ZNF507Q8TCN5 953 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 HLA-CQ95604 372 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 TMEM169Q96HH4 297 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 ACAP3Q96P50 834 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 TSPAN18Q96SJ8 248 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 CDCA3Q99618 268 aaPredicted RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 TCF25Q9BQ70 676 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 PAAF1Q9BRP4 392 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 CCDC94Q9BW85 323 aaPredicted RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 IKZF4Q9H2S9 585 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 GOLPH3LQ9H4A5 285 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 MRPL44Q9H9J2 332 aaKnown RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 TOPORSQ9NS56 1045 aaPredicted RBP9.02□□□□□ -0.97
NEK3-209ENST00000618856 THEGQ9P2T0 379 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 SERTAD1Q9UHV2 236 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 GDAQ9Y2T3 454 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 PCDHGC5Q9Y5F6 944 aa9.02□□□□□ -0.97
NEK3-209ENST00000618856 MYO7AQ13402 2215 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 FSD2A1L4K1 749 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 F8W810 466 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 OGTO15294 1046 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 PAPLNO95428 1278 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 GLP2RO95838 553 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 BMP1P13497 986 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 IDEP14735 1019 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 GARTP22102 1010 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 LIG4P49917 911 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 SOX4Q06945 474 aaPredicted RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 SNW1Q13573 536 aaKnown RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 HSP90AA2PQ14568 343 aaPredicted RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 SMC1AQ14683 1233 aaKnown RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 PDCD11Q14690 1871 aaKnown RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 PTPN14Q15678 1187 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ENOX2Q16206 610 aaKnown RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 UPP1Q16831 310 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 LEXMQ3ZCV2 418 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ZBTB41Q5SVQ8 909 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 SLFN12LQ6IEE8 588 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ZBTB33Q86T24 672 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 FMR1NBQ8N0W7 255 aaPredicted RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 TMEM87AQ8NBN3 555 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 VN1R2Q8NFZ6 395 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 SCFD1Q8WVM8 642 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 PPM1EQ8WY54 764 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 MSLNLQ96KJ4 702 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 UROC1Q96N76 676 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 FAM193BQ96PV7 902 aaPredicted RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 ASB2Q96Q27 587 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ACCSQ96QU6 501 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 TCHPQ9BT92 498 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 HERC2P3Q9BVR0 1158 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 COLEC11Q9BWP8 271 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 GBP3Q9H0R5 595 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ZHX3Q9H4I2 956 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 TMEM206Q9H813 350 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 UBE2ZQ9H832 354 aaPredicted RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 RXFP1Q9HBX9 757 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 GDPD2Q9HCC8 539 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 CLEC1BQ9P126 229 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ANKFY1Q9P2R3 1169 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 ADAM28Q9UKQ2 775 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.01□□□□□ -0.97
NEK3-209ENST00000618856 UBE4BO95155 1302 aa9.01□□□□□ -0.97
NEK3-209ENST00000618856 TISP43B9A030 160 aa9□□□□□ -0.97
NEK3-209ENST00000618856 LINC01565O15544 149 aa9□□□□□ -0.97
NEK3-209ENST00000618856 TBX10O75333 385 aa9□□□□□ -0.97
NEK3-209ENST00000618856 NR1I2O75469 434 aa9□□□□□ -0.97
NEK3-209ENST00000618856 KIF4AO95239 1232 aa9□□□□□ -0.97
NEK3-209ENST00000618856 GCNT3O95395 438 aa9□□□□□ -0.97
NEK3-209ENST00000618856 CYP3A5P20815 502 aa9□□□□□ -0.97
NEK3-209ENST00000618856 IGFBP6P24592 240 aaPredicted RBP9□□□□□ -0.97
NEK3-209ENST00000618856 CASP1P29466 404 aa9□□□□□ -0.97
NEK3-209ENST00000618856 LRPAP1P30533 357 aa9□□□□□ -0.97
NEK3-209ENST00000618856 RPL9P32969 192 aaKnown RBP9□□□□□ -0.97
NEK3-209ENST00000618856 GTF2F1P35269 517 aaKnown RBP eCLIP9□□□□□ -0.97
NEK3-209ENST00000618856 TNFSF9P41273 254 aa9□□□□□ -0.97
NEK3-209ENST00000618856 SYKP43405 635 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms