RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 IP6K2Q9UHH9 426 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 PCDHB2Q9Y5E7 798 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 TJP3O95049 919 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 ZNF211Q13398 564 aaPredicted RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 MYBPC2Q14324 1141 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 SLC30A5Q8TAD4 765 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 PURBQ96QR8 312 aaKnown RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 DUSP9Q99956 384 aaKnown RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 ANAPC5Q9UJX4 755 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 H3BRB1 525 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 PTGER2P43116 358 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 SEZ6Q53EL9 994 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 TRIM59Q8IWR1 403 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 C4orf32Q8N8J7 132 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 CCHCR1Q8TD31 782 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 MICAL1Q8TDZ2 1067 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 TUT1Q9H6E5 874 aaKnown RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 ATP8A1Q9Y2Q0 1164 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 ASTN2O75129 1339 aaPredicted RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 TOM1L1O75674 476 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 ADORA2BP29275 332 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 SDC4P31431 198 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 TRIP13Q15645 432 aaPredicted RBP14.78□□□□□ -0.04
CIITA-213ENST00000618327 HHATQ5VTY9 493 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 IL31RAQ8NI17 732 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 ETNPPLQ8TBG4 499 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 CLMNQ96JQ2 1002 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 VTA1Q9NP79 307 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
CIITA-213ENST00000618327 ITGB5P18084 799 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 DHX9Q08211 1270 aaKnown RBP14.77□□□□□ -0.04
CIITA-213ENST00000618327 PPP6R3Q5H9R7 873 aaPredicted RBP14.77□□□□□ -0.04
CIITA-213ENST00000618327 NOTUMQ6P988 496 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 MCUR1Q96AQ8 359 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 SLC12A6Q9UHW9 1150 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 MORC2Q9Y6X9 1032 aaPredicted RBP14.77□□□□□ -0.04
CIITA-213ENST00000618327 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.04
CIITA-213ENST00000618327 C17orf102A2RUQ5 167 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 NKRFO15226 690 aaKnown RBP eCLIP14.77□□□□□ -0.04
CIITA-213ENST00000618327 ITKQ08881 620 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 ARL13BQ3SXY8 428 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 FYB2Q5VWT5 728 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 FBXO38Q6PIJ6 1188 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 ARHGEF2Q92974 986 aaKnown RBP14.77□□□□□ -0.04
CIITA-213ENST00000618327 TNIP3Q96KP6 325 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 WNT8AQ9H1J5 351 aa14.77□□□□□ -0.04
CIITA-213ENST00000618327 CRYBG1Q9Y4K1 1723 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 KIF3CO14782 793 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 FAM102AQ5T9C2 384 aaPredicted RBP14.77□□□□□ -0.05
CIITA-213ENST00000618327 SLC35G2Q8TBE7 412 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.77□□□□□ -0.05
CIITA-213ENST00000618327 NIF3L1Q9GZT8 377 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 ABHD16BQ9H3Z7 469 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 ABCB6Q9NP58 842 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 MAD1L1Q9Y6D9 718 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 VIRMAQ69YN4 1812 aaKnown RBP14.77□□□□□ -0.05
CIITA-213ENST00000618327 CPA5Q8WXQ8 436 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 VCXQ9H320 206 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 SNX12Q9UMY4 172 aa14.77□□□□□ -0.05
CIITA-213ENST00000618327 GLTPD2A6NH11 291 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 KBTBD13C9JR72 458 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 PLEKP08567 350 aaPredicted RBP14.76□□□□□ -0.05
CIITA-213ENST00000618327 MRPS9P82933 396 aaKnown RBP14.76□□□□□ -0.05
CIITA-213ENST00000618327 CUL1Q13616 776 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 C1orf186Q6ZWK4 172 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 RHOT1Q8IXI2 618 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 FAM71BQ8TC56 605 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 SPIRE2Q8WWL2 714 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
CIITA-213ENST00000618327 GRID2IPA4D2P6 1211 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 BMP6P22004 513 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 SCN4BQ8IWT1 228 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 FMO2Q99518 471 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 UVRAGQ9P2Y5 699 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 PPME1Q9Y570 386 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 ATRNL1Q5VV63 1379 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 PODXLO00592 558 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 PPFIA4O75335 1185 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 NPTXRO95502 500 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 INSRRP14616 1297 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 UBA1P22314 1058 aaKnown RBP14.76□□□□□ -0.05
CIITA-213ENST00000618327 BASP1P80723 227 aaKnown RBP14.76□□□□□ -0.05
CIITA-213ENST00000618327 MPZL3Q6UWV2 235 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 SMC1BQ8NDV3 1235 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 SENP7Q9BQF6 1050 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 MMTAG2Q9BU76 263 aaKnown RBP14.76□□□□□ -0.05
CIITA-213ENST00000618327 PCSK1NQ9UHG2 260 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 NFU1Q9UMS0 254 aa14.76□□□□□ -0.05
CIITA-213ENST00000618327 KLRC4O43908 158 aa14.75□□□□□ -0.05
CIITA-213ENST00000618327 CD4P01730 458 aa14.75□□□□□ -0.05
CIITA-213ENST00000618327 VTNP04004 478 aa14.75□□□□□ -0.05
CIITA-213ENST00000618327 WEE2P0C1S8 567 aa14.75□□□□□ -0.05
CIITA-213ENST00000618327 ZNF286BP0CG31 522 aa14.75□□□□□ -0.05
CIITA-213ENST00000618327 PNMA6AP0CW24 399 aaPredicted RBP14.75□□□□□ -0.05
CIITA-213ENST00000618327 RFC1P35251 1148 aaPredicted RBP14.75□□□□□ -0.05
CIITA-213ENST00000618327 YWHAGP61981 247 aaKnown RBP eCLIP14.75□□□□□ -0.05
CIITA-213ENST00000618327 LAMTOR4Q0VGL1 99 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms