RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 POTEB3A0JP26 581 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 SLC9A1P19634 815 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 POTEBQ6S5H4 581 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 BPIFA3Q9BQP9 254 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 C11orf70Q9BRQ4 267 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 TUFT1Q9NNX1 390 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 KDM6BO15054 1643 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 MAGI2Q86UL8 1455 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 POTEFA5A3E0 1075 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 GUCA1CO95843 209 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 POTEIP0CG38 1075 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 PPP3CCP48454 512 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 NCKAP1LP55160 1127 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 POTEGQ6S5H5 508 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 TDRD3Q9H7E2 651 aaKnown RBP11.77□□□□□ -0.52
CCDC144B-208ENST00000618081 A0A1B0GW55 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L15C9J2P7 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L13C9JLJ4 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L11C9JVI0 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L18D6R9N7 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L22D6RA61 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L17D6RBQ6 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L19D6RCP7 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L20D6RJB6 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 CACNB3P54284 484 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L24Q0WX57 530 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DRAP1Q14919 205 aaPredicted RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DUX4Q9UBX2 424 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 KCNN4O15554 427 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 SLC1A1P43005 524 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 PDIA2Q13087 525 aaKnown RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 SYDE1Q6ZW31 735 aaPredicted RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 ZBED8Q8IZ13 594 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 RUBCNQ92622 972 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 GIMAP4Q9NUV9 329 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 PYCARDQ9ULZ3 195 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 SH3BP1Q9Y3L3 701 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 TNPO2O14787 897 aaKnown RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 IMPDH2P12268 514 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 SULT1E1P49888 294 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 SUSD4Q5VX71 490 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 CCDC137Q6PK04 289 aaKnown RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 MINPP1Q9UNW1 487 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 NDUFS3O75489 264 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 CNGA3Q16281 694 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 ARMC6Q6NXE6 501 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 PLEKHF1Q96S99 279 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 OSBPL9Q96SU4 736 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DNAJC7Q99615 494 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 C6orf203Q9P0P8 240 aaPredicted RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 PCDHA10Q9Y5I2 948 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 TCHHQ07283 1943 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 C3orf70A6NLC5 250 aaPredicted RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 POTECB2RU33 542 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 DHX34Q14147 1143 aaKnown RBP11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 TMEM132DQ14C87 1099 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 SARM1Q6SZW1 724 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 GRAMD1AQ96CP6 724 aa11.77□□□□□ -0.53
CCDC144B-208ENST00000618081 CASZ1Q86V15 1759 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 FRMD5Q7Z6J6 570 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 ECT2Q9H8V3 914 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 RPS6KA4O75676 772 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 ALDH1A2O94788 518 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 CD4P01730 458 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 MAGOHP61326 146 aaKnown RBP11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 SPP2Q13103 211 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 ADCK2Q7Z695 626 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 STRBPQ96SI9 672 aaKnown RBP11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 CHGBP05060 677 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 UGP2Q16851 508 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 RNF17Q9BXT8 1623 aaKnown RBP11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 PRCPP42785 496 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 ARSEP51690 589 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 GRM4Q14833 912 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 STILQ15468 1287 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 DEPDC1Q5TB30 811 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 TEX9Q8N6V9 391 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 KRT14P02533 472 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 COG1Q8WTW3 980 aa11.76□□□□□ -0.53
CCDC144B-208ENST00000618081 TAF1DQ9H5J8 278 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms