RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 SPATA31D3P0C874 917 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 TRIM49P0CI25 452 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 TRIM49CP0CI26 452 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 SLC9A1P19634 815 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 KIF11P52732 1056 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 HIRAP54198 1017 aaPredicted RBP5.95□□□□□ -1.46
CPNE4-214ENST00000617767 PMS2P54278 862 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 ODR4Q5SWX8 454 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 ARHGEF16Q5VV41 709 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 GRAMD4Q6IC98 578 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 SPATA31D4Q6ZUB0 917 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 DAAM2Q86T65 1068 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 FAM133AQ8N9E0 248 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 SIKE1Q9BRV8 207 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 GOLPH3Q9H4A6 298 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 MLXIPQ9HAP2 919 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 PLCB1Q9NQ66 1216 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 GGA2Q9UJY4 613 aa5.95□□□□□ -1.46
CPNE4-214ENST00000617767 KDM3AQ9Y4C1 1321 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 GOLGA8IPA6NC78 632 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 GOLGA8JA6NMD2 632 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 SH3BP5O60239 455 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 GNA14O95837 355 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FOSP01100 380 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 GSTT2P0CG29 244 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 GSTT2BP0CG30 244 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 RPA1P27694 616 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 EIF4A3P38919 411 aaKnown RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 NT5C2P49902 561 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 MTTPP55157 894 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 TGFB2P61812 414 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FSTL1Q12841 308 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 TNFAIP1Q13829 316 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 LBRQ14739 615 aaKnown RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 ALS2CLQ60I27 953 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 OLFML2BQ68BL8 750 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 RINT1Q6NUQ1 792 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 LRRC55Q6ZSA7 311 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 OTUD6AQ7L8S5 288 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 MIER3Q7Z3K6 550 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 GUF1Q8N442 669 aaKnown RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 DCLK2Q8N568 766 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 CCDC42Q96M95 316 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 VCX3BQ9H321 246 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 SH2D4AQ9H788 454 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 VCX3AQ9NNX9 186 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 EHD2Q9NZN4 543 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 HESX1Q9UBX0 185 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FEM1BQ9UK73 627 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FAM184BQ9ULE4 1060 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 COL4A3BPQ9Y5P4 624 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 ARHGEF35A5YM69 484 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 A6NNZ2 444 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 HOXD13P35453 343 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 MRPS9P82933 396 aaKnown RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FKBP3Q00688 224 aaKnown RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 MCL1Q07820 350 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 SF3A3Q12874 501 aaKnown RBP eCLIP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 ITGB3BPQ13352 177 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 MTMR1Q13613 665 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 UGCGQ16739 394 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 TUBB8Q3ZCM7 444 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 EAPPQ56P03 285 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 RNF207Q6ZRF8 634 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FAM83AQ86UY5 434 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 BPHLQ86WA6 291 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 TMTC1Q8IUR5 882 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 APLFQ8IW19 511 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 SCUBE1Q8IWY4 988 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 SLC16A10Q8TF71 515 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 PPP1R12CQ9BZL4 782 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 FHDC1Q9C0D6 1143 aaPredicted RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 RNF146Q9NTX7 359 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 SEPT11Q9NVA2 429 aaKnown RBP5.94□□□□□ -1.46
CPNE4-214ENST00000617767 ATAD3AQ9NVI7 634 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 CARD8Q9Y2G2 431 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 ATAD5Q96QE3 1844 aa5.94□□□□□ -1.46
CPNE4-214ENST00000617767 PVALEFA0A1B0GWK0 134 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 NCK2O43639 380 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 AKAP3O75969 853 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 KRT14P02533 472 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 SERPINB4P48594 390 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 HERVK_113P62684 666 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 KCNH2Q12809 1159 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 RIPK1Q13546 671 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 BTNL9Q6UXG8 535 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 SND1Q7KZF4 910 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPNE4-214ENST00000617767 FAM178BQ8IXR5 827 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 CRYGNQ8WXF5 182 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 LZICQ8WZA0 190 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 OTUD5Q96G74 571 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 DRC3Q9H069 523 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 MAGEF1Q9HAY2 307 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 ETNK2Q9NVF9 386 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.93□□□□□ -1.46
CPNE4-214ENST00000617767 RNF181Q9P0P0 153 aa5.93□□□□□ -1.46
CPNE4-214ENST00000617767 PACSIN2Q9UNF0 486 aaPredicted RBP5.93□□□□□ -1.46
CPNE4-214ENST00000617767 KIAA1217Q5T5P2 1943 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms