RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 VNN1O95497 513 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 C22orf31O95567 290 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 BRD3Q15059 726 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 SLC35G2Q8TBE7 412 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 RFFLQ8WZ73 363 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 CGRRF1Q99675 332 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 C2orf40Q9H1Z8 148 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 NMRK2Q9NPI5 230 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 C1orf112Q9NSG2 853 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 EVPLQ92817 2033 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 FAM189A1O60320 539 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZC3H11AO75152 810 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 HUNKP57058 714 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 SPOPLQ6IQ16 392 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 SPATA4Q8NEY3 305 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 ARFGAP3Q9NP61 516 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 CPA4Q9UI42 421 aa18.68■□□□□ 0.58
PCDHGC3-205ENST00000617641 ANKRD62A6NC57 917 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 FTLP02792 175 aaPredicted RBP18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 MMEP08473 750 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 KRT5P13647 590 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 CYP11B1P15538 503 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 GCNT1Q02742 428 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 TFDP1Q14186 410 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 RPS6KA1Q15418 735 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 OR5B17Q8NGF7 314 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 NPLOC4Q8TAT6 608 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 INO80B-WBP1J3KQ70 363 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 ABLIM1O14639 778 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 KIF4AO95239 1232 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 CALCAP01258 141 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 MAPK4P31152 587 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 PAFAH1B1P43034 410 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 FMO1Q01740 532 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 WDR44Q5JSH3 913 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZNF484Q5JVG2 852 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 DAAM2Q86T65 1068 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 BRSK2Q8IWQ3 736 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 EMID1Q96A84 441 aaPredicted RBP18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 INO80BQ9C086 356 aaPredicted RBP18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 ISCUQ9H1K1 167 aa18.67■□□□□ 0.58
PCDHGC3-205ENST00000617641 B4GALT5O43286 388 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 SMPD1P17405 629 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 ENOSF1Q7L5Y1 443 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 SLFN11Q7Z7L1 901 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 LMBR1Q8WVP7 490 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 TINF2Q9BSI4 451 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 MINDY3Q9H8M7 445 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 BUB1BO60566 1050 aaPredicted RBP18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 PDE6CP51160 858 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 ITIH3Q06033 890 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 MCL1Q07820 350 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 CFAP221Q4G0U5 840 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 SCARA3Q6AZY7 606 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 PEX26Q7Z412 305 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 TAF4BQ92750 862 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 PPP1R16BQ96T49 567 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 C16orf70Q9BSU1 422 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 OGFRQ9NZT2 677 aa18.66■□□□□ 0.58
PCDHGC3-205ENST00000617641 KCNK3O14649 394 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 OGTO15294 1046 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 PTENP60484 403 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 CBX1P83916 185 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 ACVR2BQ13705 512 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 CDR2LQ86X02 465 aaPredicted RBP18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 MMGT1Q8N4V1 131 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 FAM212AQ96EL1 285 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 FZD8Q9H461 694 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 APOBEC3GQ9HC16 384 aaKnown RBP18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 COG5Q9UP83 839 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 STXBP5LQ9Y2K9 1186 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 ACKR2O00590 384 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 RTN2O75298 545 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 ITGBL1O95965 494 aaPredicted RBP18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 CDR2Q01850 454 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 MBTD1Q05BQ5 628 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 LONRF2Q1L5Z9 754 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 ATF7IP2Q5U623 682 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 SYCE1Q8N0S2 351 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 DDX1Q92499 740 aaKnown RBP18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 ABCB6Q9NP58 842 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 RNF14Q9UBS8 474 aa18.65■□□□□ 0.58
PCDHGC3-205ENST00000617641 SLC15A5A6NIM6 579 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 IGF2BP3O00425 579 aaKnown RBP eCLIP18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 ASAP2O43150 1006 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 ADCY6O43306 1168 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 PHACTR2O75167 634 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 CSDE1O75534 798 aaKnown RBP18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 IQCF3P0C7M6 154 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 RNASE9P60153 205 aaKnown RBP18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 TMEM132AQ24JP5 1023 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 DUSP28Q4G0W2 176 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 EEF1DP3Q658K8 133 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 WDR93Q6P2C0 686 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 MPZL3Q6UWV2 235 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 TSHZ1Q6ZSZ6 1077 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 NT5DC3Q86UY8 548 aa18.64■□□□□ 0.57
PCDHGC3-205ENST00000617641 ABHD16BQ9H3Z7 469 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms