RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 MTX1Q13505 466 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 DPCR1Q3MIW9 517 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 PXYLP1Q8TE99 480 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 VTA1Q9NP79 307 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 SLC12A6Q9UHW9 1150 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 COLQQ9Y215 455 aaPredicted RBP16.34■□□□□ 0.21
NOP56-220ENST00000616692 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
NOP56-220ENST00000616692 NVLO15381 856 aaKnown RBP16.33■□□□□ 0.21
NOP56-220ENST00000616692 RTP1P59025 263 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 SPCS2Q15005 226 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 TRPM8Q7Z2W7 1104 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 TRAPPC11Q7Z392 1133 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 RAET1EQ8TD07 263 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 OSCP1Q8WVF1 389 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 SCG3Q8WXD2 468 aaKnown RBP16.33■□□□□ 0.21
NOP56-220ENST00000616692 KLHL29Q96CT2 875 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 MMS19Q96T76 1030 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 ARHGAP39Q9C0H5 1083 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 POLMQ9NP87 494 aaPredicted RBP16.33■□□□□ 0.21
NOP56-220ENST00000616692 ANO2Q9NQ90 1003 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.21
NOP56-220ENST00000616692 TBC1D30Q9Y2I9 924 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 USP20Q9Y2K6 914 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 GAKO14976 1311 aa16.33■□□□□ 0.21
NOP56-220ENST00000616692 A0A0G2JLL6 359 aaPredicted RBP16.33■□□□□ 0.2
NOP56-220ENST00000616692 TMOD1P28289 359 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 HMOX2P30519 316 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 MTF1Q14872 753 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 GPAT2Q6NUI2 795 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 PRRT2Q7Z6L0 340 aaPredicted RBP16.33■□□□□ 0.2
NOP56-220ENST00000616692 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 DDHD1Q8NEL9 900 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 OTUD7AQ8TE49 926 aaPredicted RBP16.33■□□□□ 0.2
NOP56-220ENST00000616692 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 HSPBAP1Q96EW2 488 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 PIH1D3Q9NQM4 214 aaKnown RBP16.33■□□□□ 0.2
NOP56-220ENST00000616692 IL1RAPL1Q9NZN1 696 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 HMGXB4Q9UGU5 601 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 XPO7Q9UIA9 1087 aaKnown RBP16.33■□□□□ 0.2
NOP56-220ENST00000616692 NR2E3Q9Y5X4 410 aa16.33■□□□□ 0.2
NOP56-220ENST00000616692 H0YGN5 161 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 ATP1A3P13637 1013 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 CACNB3P54284 484 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 GJA9P57773 515 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 ZC2HC1CQ53FD0 456 aaPredicted RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 IGSF5Q9NSI5 407 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 HACD3Q9P035 362 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 DOCK2Q92608 1830 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 TMEM114B3SHH9 223 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 E9PBE3 544 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 HPDP32754 393 aaPredicted RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 NIPAL4Q0D2K0 466 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 GSTA3Q16772 222 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 BBS5Q8N3I7 341 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 FRS2Q8WU20 508 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 DNAJC1Q96KC8 554 aaKnown RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 RAB17Q9H0T7 212 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 A0A0U1RQJ8 604 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 HIP1O00291 1037 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 ORC4O43929 436 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 EIF2S1P05198 315 aaKnown RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 PABPC4LP0CB38 370 aaKnown RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 COL6A1P12109 1028 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 CENPAP49450 140 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 IQCKQ8N0W5 287 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 RIBC1Q8N443 379 aaPredicted RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 ENDOVQ8N8Q3 282 aaKnown RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 SCYL1Q96KG9 808 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 XPO6Q96QU8 1125 aaKnown RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 CRNKL1Q9BZJ0 848 aaKnown RBP16.32■□□□□ 0.2
NOP56-220ENST00000616692 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 PCDHGB3Q9Y5G1 929 aa16.32■□□□□ 0.2
NOP56-220ENST00000616692 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 PEX11AO75192 247 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 DDHD2O94830 711 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 CCL5P13501 91 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 CDK7P50613 346 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 PPP2R2AP63151 447 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
NOP56-220ENST00000616692 KRT77Q7Z794 578 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 TMTC1Q8IUR5 882 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 ANKMY2Q8IV38 441 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 ZBED8Q8IZ13 594 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 SLC38A6Q8IZM9 456 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
NOP56-220ENST00000616692 PRO3102Q9H379 93 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 USP40Q9NVE5 1235 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 DDX56Q9NY93 547 aaKnown RBP16.31■□□□□ 0.2
NOP56-220ENST00000616692 CPA4Q9UI42 421 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 A0A088AWK7 358 aa16.31■□□□□ 0.2
NOP56-220ENST00000616692 BACH1O14867 736 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms