RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 GJD2Q9UKL4 321 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 A0A087WZ62 844 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 A6NJR5 290 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 OGTO15294 1046 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 HLA-DRAP01903 254 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 TFRCP02786 760 aaKnown RBP10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 C4BPAP04003 597 aaKnown RBP10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 IQCF3P0C7M6 154 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 PROZP22891 400 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 CTGFP29279 349 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 USP8P40818 1118 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 ZNF568Q3ZCX4 644 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 MARCH8Q5T0T0 291 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 RNF10Q8N5U6 811 aaKnown RBP10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 SLC30A5Q8TAD4 765 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 SLC20A1Q8WUM9 679 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 SHC3Q92529 594 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 TATDN2Q93075 761 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 FDXACB1Q9BRP7 624 aaPredicted RBP10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 PTPRHQ9HD43 1115 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 C1orf112Q9NSG2 853 aa10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 SEPT11Q9NVA2 429 aaKnown RBP10.81□□□□□ -0.68
AL353770.3-201ENST00000616253 ATP8B3O60423 1300 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 ZC3H11AO75152 810 aaKnown RBP eCLIP10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 CSDE1O75534 798 aaKnown RBP10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 VNN1O95497 513 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 TM4SF4P48230 202 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 RBM10P98175 930 aaKnown RBP10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 POU5F1BQ06416 359 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 WHAMMP3Q1A5X7 153 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 ERCC6LQ2NKX8 1250 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 PAPD7Q5XG87 772 aaKnown RBP10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 EEF1DP3Q658K8 133 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 CDR2LQ86X02 465 aaPredicted RBP10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 FAM71AQ8IYT1 594 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 ANKRD7Q92527 254 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 MAP7D2Q96T17 732 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 AGPAT1Q99943 283 aa10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 PRMT7Q9NVM4 692 aaPredicted RBP10.8□□□□□ -0.68
AL353770.3-201ENST00000616253 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 EFCAB8A8MWE9 144 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 CA12O43570 354 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 F2P00734 622 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 H2AFZP0C0S5 128 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 TNFAIP3P21580 790 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 GCNT1Q02742 428 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 WDR44Q5JSH3 913 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 H2AFVQ71UI9 128 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 IFNLR1Q8IU57 520 aaPredicted RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 THNSL1Q8IYQ7 743 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 OR5B17Q8NGF7 314 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 LMBR1Q8WVP7 490 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 NLRP7Q8WX94 980 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 DHX38Q92620 1227 aaKnown RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 KAT2BQ92831 832 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SCLT1Q96NL6 688 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 CDT1Q9H211 546 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SETD4Q9NVD3 440 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 PUF60Q9UHX1 559 aaKnown RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 CPSF3Q9UKF6 684 aaKnown RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 JRKLQ9Y4A0 524 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SAR1BQ9Y6B6 198 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 TMCO5BA8MYB1 307 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 CYP26A1O43174 497 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 ZEB2O60315 1214 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SRGAP2O75044 1071 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SGPL1O95470 568 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 IGHA2P01877 340 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SMIM10L2AP0DMW4 78 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SMIM10L2BP0DMW5 78 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 RGS19P49795 217 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 AMHR2Q16671 573 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 FAM187BQ17R55 369 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SPOPLQ6IQ16 392 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 CYP4F22Q6NT55 531 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 PALB2Q86YC2 1186 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 WDR49Q8IV35 697 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 KIAA0319LQ8IZA0 1049 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 CEP112Q8N8E3 955 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 EPS8L1Q8TE68 723 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 PPP1R13LQ8WUF5 828 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 UBXN4Q92575 508 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 HHIPL1Q96JK4 782 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 ARID3AQ99856 593 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 ARHGAP39Q9C0H5 1083 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 NOCTQ9UK39 431 aaKnown RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 TNFSF13BQ9Y275 285 aa10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 TRIP12Q14669 1992 aaPredicted RBP10.79□□□□□ -0.68
AL353770.3-201ENST00000616253 RRN3P2A6NIE6 340 aa10.78□□□□□ -0.68
AL353770.3-201ENST00000616253 PHACTR2O75167 634 aa10.78□□□□□ -0.68
AL353770.3-201ENST00000616253 PALMO75781 387 aa10.78□□□□□ -0.68
AL353770.3-201ENST00000616253 CLSTN1O94985 981 aa10.78□□□□□ -0.68
AL353770.3-201ENST00000616253 CPT1AP50416 773 aa10.78□□□□□ -0.68
AL353770.3-201ENST00000616253 FCGRTP55899 365 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms