RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SLC44A3Q8N4M1 653 aa22.89■■□□□ 1.25
TRAPPC3-208ENST00000616074 FAM184AQ8NB25 1140 aa22.89■■□□□ 1.25
TRAPPC3-208ENST00000616074 IFT74Q96LB3 600 aa22.89■■□□□ 1.25
TRAPPC3-208ENST00000616074 LRWD1Q9UFC0 647 aa22.89■■□□□ 1.25
TRAPPC3-208ENST00000616074 NOL7Q9UMY1 257 aaKnown RBP22.89■■□□□ 1.25
TRAPPC3-208ENST00000616074 KIAA1024Q9UPX6 916 aa22.89■■□□□ 1.25
TRAPPC3-208ENST00000616074 LAMP2P13473 410 aa22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 NBL1P41271 181 aa22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 GLRA4Q5JXX5 417 aa22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 NT5DC1Q5TFE4 455 aa22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 KIFAP3Q92845 792 aa22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 ZSCAN31Q96LW9 406 aaPredicted RBP22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 DDX19AQ9NUU7 478 aaKnown RBP22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.88■■□□□ 1.251e-17■■■■■ 62.9
TRAPPC3-208ENST00000616074 WNT16Q9UBV4 365 aa22.88■■□□□ 1.25
TRAPPC3-208ENST00000616074 KRBA1A5PL33 1030 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 ADAM12O43184 909 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 IGFBP6P24592 240 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 EFNA5P52803 228 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 ELAVL2Q12926 359 aaKnown RBP22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 ATF7IP2Q5U623 682 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 CCDC105Q8IYK2 499 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 SNX29Q8TEQ0 813 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 NXPE3Q969Y0 559 aa22.87■■□□□ 1.25
TRAPPC3-208ENST00000616074 SRFP11831 508 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 TOB1P50616 345 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 LIN9Q5TKA1 542 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 ASCL5Q7RTU5 278 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 GRASPQ7Z6J2 395 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 IGSF22Q8N9C0 903 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 ST13P5Q8NFI4 369 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 PPP1R10Q96QC0 940 aaKnown RBP22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 KIF2CQ99661 725 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 RTP3Q9BQQ7 232 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 SH2B1Q9NRF2 756 aaPredicted RBP22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 CA14Q9ULX7 337 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 MYH15Q9Y2K3 1946 aa22.86■■□□□ 1.25
TRAPPC3-208ENST00000616074 ANHXE9PGG2 379 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 C8AP07357 584 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 FSHRP23945 695 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 U2AF2P26368 475 aaKnown RBP eCLIP22.85■■□□□ 1.256e-6■□□□□ 10.3
TRAPPC3-208ENST00000616074 CLCNKBP51801 687 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 PTGDRQ13258 359 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 HTR4Q13639 388 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 PDIA5Q14554 519 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 GPR152Q8TDT2 470 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 PCDHB6Q9Y5E3 794 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 NUMBLQ9Y6R0 609 aa22.85■■□□□ 1.25
TRAPPC3-208ENST00000616074 PHLPP2Q6ZVD8 1323 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 PRR23AA6NEV1 266 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 PP2D1A8MPX8 630 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 E9PMD0 336 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 TMEM189-UBE2V1I3L0A0 370 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 K7ERI5 159 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 HNRNPA1P09651 372 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 FGFR3P22607 806 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 NTHL1P78549 312 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 PPM1LQ5SGD2 360 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 PDXDC1Q6P996 788 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 CD300LGQ6UXG3 332 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 FRMD5Q7Z6J6 570 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 CEP120Q8N960 986 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 GOLGA2P5Q9HBQ8 144 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 TNFSF13BQ9Y275 285 aa22.84■■□□□ 1.25
TRAPPC3-208ENST00000616074 CCDC169A6NNP5 214 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 STK25O00506 426 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 CCL16O15467 120 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 B3GAT3O94766 335 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 NPTX2P47972 431 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 PEX3P56589 373 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 DAW1Q8N136 415 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 DTWD2Q8NBA8 298 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 RAB34Q9BZG1 259 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 CDT1Q9H211 546 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 STK24Q9Y6E0 443 aa22.83■■□□□ 1.25
TRAPPC3-208ENST00000616074 NOTCH4Q99466 2003 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 HIP1RO75146 1068 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 HOXA9P31269 272 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 OR1D2P34982 312 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 RAB33AQ14088 237 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 ANGPT1Q15389 498 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 IL17AQ16552 155 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 UPP1Q16831 310 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 DCLRE1AQ6PJP8 1040 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 RSPO2Q6UXX9 243 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 TAS1R3Q7RTX0 852 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 APBB1IPQ7Z5R6 666 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 C3orf58Q8NDZ4 430 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 SLC7A14Q8TBB6 771 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 UROC1Q96N76 676 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 ACO2Q99798 780 aaKnown RBP22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 RUSC1Q9BVN2 902 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 TBC1D17Q9HA65 648 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 MTRRQ9UBK8 725 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 DAXXQ9UER7 740 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 POLIQ9UNA4 740 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 DNM3Q9UQ16 869 aa22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 ZFP37Q9Y6Q3 630 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC3-208ENST00000616074 CITO14578 2027 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms