RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 PRR12Q9ULL5 1215 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 MYH9P35579 1960 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 ANGPT2O15123 496 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 DYNC1LI2O43237 492 aaPredicted RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 URODP06132 367 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 SKP1P63208 163 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 NSUN6Q8TEA1 469 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 ADGRA2Q96PE1 1338 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 PGK2P07205 417 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 LAMB3Q13751 1172 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 ZRANB3Q5FWF4 1079 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 DCP1BQ8IZD4 617 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 CCDC197Q8NCU1 140 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 USP18Q9UMW8 372 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 FGFR1P11362 822 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 IPCEF1Q8WWN9 437 aaPredicted RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 SGSM2O43147 1006 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 CKBP12277 381 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 TCP1P17987 556 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 CUL3Q13618 768 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 ATL2Q8NHH9 583 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 INTS13Q9NVM9 706 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 AURKCQ9UQB9 309 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 LOC102724428A0A0B4J2F2 783 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 SIK1P57059 783 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 TMEM35BQ8NCS4 154 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 ATXN7L3BQ96GX2 97 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 ELAC2Q9BQ52 826 aaKnown RBP13.3□□□□□ -0.28
TCF4-248ENST00000616053 NSMCE4AQ9NXX6 385 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 UVRAGQ9P2Y5 699 aa13.3□□□□□ -0.28
TCF4-248ENST00000616053 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 IFRD1O00458 451 aaPredicted RBP13.29□□□□□ -0.28
TCF4-248ENST00000616053 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 RBBP4Q09028 425 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 MCOLN3Q8TDD5 553 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 HS6ST1O60243 411 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
TCF4-248ENST00000616053 C21orf59P57076 290 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 KYAT1Q16773 422 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
TCF4-248ENST00000616053 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 ARRDC4Q8NCT1 418 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 FAM162AQ96A26 154 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 TPD52L2O43399 206 aaKnown RBP13.29□□□□□ -0.28
TCF4-248ENST00000616053 CKMP06732 381 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 GSTM1P09488 218 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 ITGA4P13612 1032 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 BTNL9Q6UXG8 535 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 TMC7Q7Z402 723 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 KIFC1Q9BW19 673 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 MYO3BQ8WXR4 1341 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 S100GP29377 79 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 CCDC51Q96ER9 411 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 NEK6Q9HC98 313 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 ERAP1Q9NZ08 941 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 TNKSO95271 1327 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 ALG11Q2TAA5 492 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 TTC39CQ8N584 583 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 SLC7A14Q8TBB6 771 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 ERO1AQ96HE7 468 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 C16orf96A6NNT2 1141 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 AVPR1AP37288 418 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 HNMTP50135 292 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 CYP4X1Q8N118 509 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 COLEC11Q9BWP8 271 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 SMU1Q2TAY7 513 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 GNASQ5JWF2 1037 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 BTBD9Q96Q07 612 aa13.29□□□□□ -0.28
TCF4-248ENST00000616053 SULT1E1P49888 294 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CCR4P51679 360 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CDC37Q16543 378 aaPredicted RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 ADAM22Q9P0K1 906 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 B2RBV5 119 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 NOS3P29474 1203 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 HOXC9P31274 260 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 CDC42EP1Q00587 391 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 ARMC4Q5T2S8 1044 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 LRRC74BQ6ZQY2 392 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 ZBTB38Q8NAP3 1195 aaPredicted RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 NEK7Q8TDX7 302 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 NMRK2Q9NPI5 230 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 ZNF711Q9Y462 761 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
TCF4-248ENST00000616053 ACTN3Q08043 901 aaPredicted RBP13.28□□□□□ -0.28
TCF4-248ENST00000616053 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms