RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 WNK4Q96J92 1243 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 CFAP57Q96MR6 1250 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 WNT8AQ9H1J5 351 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 GPRC5CQ9NQ84 441 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 RGPD8O14715 1765 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 PODXLO00592 558 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 PRRG1O14668 218 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 SLC4A1P02730 911 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 ACADSBP45954 432 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 ALDH7A1P49419 539 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 C2orf54Q08AI8 447 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 GIT2Q14161 759 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 MAPRE1Q15691 268 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 GRIK4Q16099 956 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 KIZQ2M2Z5 673 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 SHCBP1Q8NEM2 672 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 ENGASEQ8NFI3 743 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 UHMK1Q8TAS1 419 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TAF1DQ9H5J8 278 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 LSM7Q9UK45 103 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 BUB1BO60566 1050 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 RNF40O75150 1001 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 MOCS2O96007 188 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 ZNF286BP0CG31 522 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 KRT3P12035 628 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 INSRRP14616 1297 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 KPNA2P52292 529 aaKnown RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 KIAA1755Q5JYT7 1200 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 RASGRP2Q7LDG7 609 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TMEM169Q96HH4 297 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 TRPV6Q9H1D0 765 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 PDE11AQ9HCR9 933 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 KBTBD4Q9NVX7 518 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 FARP1Q9Y4F1 1045 aaPredicted RBP10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 PCDHB2Q9Y5E7 798 aa10.03□□□□□ -0.8
CLTCL1-208ENST00000615606 SSU72P8A0A1W2PR75 194 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 POC1B-GALNT4F8VUJ3 575 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 PDGFRBP09619 1106 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 ODC1P11926 461 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 SP3Q02447 781 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 MFSD10Q14728 455 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 REM2Q8IYK8 340 aaPredicted RBP10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 MTMR14Q8NCE2 650 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 REPS2Q8NFH8 660 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 TJP2Q9UDY2 1190 aa10.02□□□□□ -0.8
CLTCL1-208ENST00000615606 YDJCA8MPS7 323 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 VTNP04004 478 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CA4P22748 312 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 SLC1A1P43005 524 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CENPUQ71F23 418 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 DHX35Q9H5Z1 703 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 UBN1Q9NPG3 1134 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 RSPH10B2B2RC85 870 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 STK25O00506 426 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CABYRO75952 493 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CYBBP04839 570 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 RSPH10BP0C881 870 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 MAPTP10636 758 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 TAL1P17542 331 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 MSH2P43246 934 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 RAPH1Q70E73 1250 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 FAF2Q96CS3 445 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 EPAS1Q99814 870 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 TINF2Q9BSI4 451 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 AP1M1Q9BXS5 423 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 DPP3Q9NY33 737 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 UVRAGQ9P2Y5 699 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 HEY1Q9Y5J3 304 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CYTH3O43739 400 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 PLA2G6O60733 806 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 GNL1P36915 607 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 ATN1P54259 1190 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 BCAR1P56945 870 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 ARID5BQ14865 1188 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 IQCB1Q15051 598 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 FSCN1Q16658 493 aaKnown RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 BBS9Q3SYG4 887 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CYP4F22Q6NT55 531 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 NFRKBQ6P4R8 1299 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 CCDC62Q6P9F0 684 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 RAB44Q7Z6P3 723 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 ZNF677Q86XU0 584 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 STKLD1Q8NE28 680 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 MGARPQ8TDB4 240 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 PRG3Q9Y2Y8 225 aaPredicted RBP10.02□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM86B1E9PN63 330 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 CIB2O75838 187 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 FAM86B2P0C5J1 330 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 GTF2H1P32780 548 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 SERPINB6P35237 376 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PSEN2P49810 448 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 RAD51Q06609 339 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 TRIP13Q15645 432 aaPredicted RBP10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 BTNL9Q6UXG8 535 aa10.01□□□□□ -0.81
CLTCL1-208ENST00000615606 PCGF5Q86SE9 256 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms