RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CYP24A1Q07973 514 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 DSC3Q14574 896 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 NOLC1Q14978 699 aaKnown RBP eCLIP8.75□□□□□ -1.01
PCDH9-205ENST00000614931 ZNF568Q3ZCX4 644 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 FAM186BQ8IYM0 893 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 GPD1LQ8N335 351 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 TMEM130Q8N3G9 435 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 RDH13Q8NBN7 331 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 LINC01599Q8WXQ3 324 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 RAD9AQ99638 391 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 FAM213AQ9BRX8 229 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 ZBED2Q9BTP6 218 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 MKNK1Q9BUB5 465 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 MSTO1Q9BUK6 570 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 XPO4Q9C0E2 1151 aaKnown RBP8.75□□□□□ -1.01
PCDH9-205ENST00000614931 VPS16Q9H269 839 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 CXCL16Q9H2A7 254 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 TMX1Q9H3N1 280 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 TOPORSQ9NS56 1045 aaPredicted RBP8.75□□□□□ -1.01
PCDH9-205ENST00000614931 CHD7Q9P2D1 2997 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 PTPRJQ12913 1337 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 TTC3P53804 2025 aa8.75□□□□□ -1.01
PCDH9-205ENST00000614931 FNDC1Q4ZHG4 1894 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 EPOPA6NHQ4 379 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 LGALS16A8MUM7 142 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 RFXAPO00287 272 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 N4BP3O15049 544 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 CLDN3O15551 220 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 EXTL3O43909 919 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 ADCY5O95622 1261 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 RPLP2P05387 115 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 MCF2P10911 925 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 EPB41P11171 864 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 SFPQP23246 707 aaKnown RBP eCLIP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 RPL13P26373 211 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 PSMC2P35998 433 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 ACOT2P49753 483 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 DLG4P78352 724 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 HTRA4P83105 476 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 SPAG1Q07617 926 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 SNRNP35Q16560 246 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 MAN2A1Q16706 1144 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 LMBRD2Q68DH5 695 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 SCARA3Q6AZY7 606 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 SLFN12LQ6IEE8 588 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 FRMD5Q7Z6J6 570 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 CREBRFQ8IUR6 639 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 FAM114A1Q8IWE2 563 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 BRSK2Q8IWQ3 736 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 THNSL1Q8IYQ7 743 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 APBB2Q92870 758 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 TOP1MTQ969P6 601 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 SLC35C1Q96A29 364 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 TUBGCP2Q9BSJ2 902 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 TRIM5Q9C035 493 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 NXF3Q9H4D5 531 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 CERS4Q9HA82 394 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 RTN4Q9NQC3 1192 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 CPSF3Q9UKF6 684 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 PADI3Q9ULW8 664 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 PIN4Q9Y237 131 aaKnown RBP8.74□□□□□ -1.01
PCDH9-205ENST00000614931 INSL6Q9Y581 213 aa8.74□□□□□ -1.01
PCDH9-205ENST00000614931 COL4A6Q14031 1691 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 CDH23Q9H251 3354 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 LINC01553A4QN01 128 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 LRRC10BA6NIK2 292 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 LRRIQ3A6PVS8 624 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 MEIS3P2A8K0S8 358 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 MAPK13O15264 365 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 LPXNO60711 386 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 LRRN2O75325 713 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 FGFR1OPO95684 399 aaKnown RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 GNA14O95837 355 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 SERPINC1P01008 464 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 STAG3L1P0CL83 205 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 CXCL8P10145 99 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 ATF7P17544 494 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 AXLP30530 894 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PBX1P40424 430 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 KLK7P49862 253 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 UBASH3AP57075 661 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 OSTNP61366 133 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 ERVK-21P61565 698 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PPP3CAQ08209 521 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 BFSP1Q12934 665 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 PAK2Q13177 524 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 CCDC85BQ15834 202 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 ENOX2Q16206 610 aaKnown RBP8.73□□□□□ -1.01
PCDH9-205ENST00000614931 FAM117BQ6P1L5 589 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 NOTUMQ6P988 496 aa8.73□□□□□ -1.01
PCDH9-205ENST00000614931 SLC27A1Q6PCB7 646 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms