RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CPT1CQ8TCG5 803 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 SLC25A43Q8WUT9 341 aaPredicted RBP6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 HDAC10Q969S8 669 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 SLC46A2Q9BY10 475 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 LDAHQ9H6V9 325 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 POGKQ9P215 609 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 INTUQ9ULD6 942 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 CHST2Q9Y4C5 530 aa6.71□□□□□ -1.34
SCAMP1-205ENST00000614488 LOC105371045A0A1W2PR82 267 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 CYR61O00622 381 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 WNT10BO00744 389 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 SGTAO43765 313 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 RAP2AP10114 183 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 ATP5JP18859 108 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 MCM7P33993 719 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 ALDH1A3P47895 512 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 ATP8B2P98198 1209 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 NHLH2Q02577 135 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 MTM1Q13496 603 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 SEM1Q6ZVN7 128 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 SYT12Q8IV01 421 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 RNF169Q8NCN4 708 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 DPF2Q92785 391 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 LENG9Q96B70 501 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 FAM193BQ96PV7 902 aaPredicted RBP6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 MRI1Q9BV20 369 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 IPPQ9Y573 584 aa6.7□□□□□ -1.34
SCAMP1-205ENST00000614488 LEFTY2O00292 366 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 AMY1AP04745 511 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 ZSCAN20P17040 1043 aaPredicted RBP6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 MAKP20794 623 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 FPR1P21462 350 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 CCND1P24385 295 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 PCSK1P29120 753 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 RECQLP46063 649 aaPredicted RBP6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 IGBP1P78318 339 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 TMEM240Q5SV17 173 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 GDF7Q7Z4P5 450 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 CCHCR1Q8TD31 782 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 COA7Q96BR5 231 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 GPRC5BQ9NZH0 403 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 ACTL7AQ9Y615 435 aa6.69□□□□□ -1.34
SCAMP1-205ENST00000614488 GAGE12BA1L429 117 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 GAGE12HA6NDE8 117 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 AHRRA9YTQ3 701 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 HTRA2O43464 458 aaPredicted RBP6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 SPATA31D3P0C874 917 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 DDCP20711 480 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 RAP2BP61225 183 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 CDC42EP1Q00587 391 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 KIF23Q02241 960 aaPredicted RBP6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 ODF1Q14990 250 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 IGFL4Q6B9Z1 124 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 SPATA31D4Q6ZUB0 917 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 RHOUQ7L0Q8 258 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 PLXDC1Q8IUK5 500 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 RHOT1Q8IXI2 618 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 SYNE4Q8N205 404 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 ZGPATQ8N5A5 531 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 SLC16A11Q8NCK7 471 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 STON2Q8WXE9 905 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 CHMP4CQ96CF2 233 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 TRPM5Q9NZQ8 1165 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 FZD1Q9UP38 647 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 REXO2Q9Y3B8 237 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 HS3ST3A1Q9Y663 406 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 PNPLA7Q6ZV29 1317 aa6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 MYBBP1AQ9BQG0 1328 aaKnown RBP6.68□□□□□ -1.34
SCAMP1-205ENST00000614488 DRGXA6NNA5 263 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 RNASET2O00584 256 aaKnown RBP6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 POMCP01189 267 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 FSHBP01225 129 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 ADH4P08319 380 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 NR4A1P22736 598 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 EDNRBP24530 442 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 RNASE9P60153 205 aaKnown RBP6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 ATP2B3Q16720 1220 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 FAM102AQ5T9C2 384 aaPredicted RBP6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 METRNLQ641Q3 311 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 PPP4R3AQ6IN85 833 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 ZBTB46Q86UZ6 589 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 AMER2Q8N7J2 671 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 HAS1Q92839 578 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 SCAND2PQ9GZW5 306 aaPredicted RBP6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 NRDE2Q9H7Z3 1164 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 MMRN2Q9H8L6 949 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 SLC2A4RGQ9NR83 387 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 TDP1Q9NUW8 608 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 SLC23A1Q9UHI7 598 aa6.67□□□□□ -1.34
SCAMP1-205ENST00000614488 CCDC154A6NI56 674 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 AKAP8O43823 692 aaKnown RBP6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 SNUPNO95149 360 aaKnown RBP6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 ZRANB2O95218 330 aaKnown RBP eCLIP6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 ALAS1P13196 640 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 NEK2P51955 445 aa6.66□□□□□ -1.34
SCAMP1-205ENST00000614488 CHN2P52757 468 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms