RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	NR2E3	Q9Y5X4	410 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	POTEF	A5A3E0	1075 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	MYO1C	O00159	1063 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	IRF1	P10914	325 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	PCSK1	P29120	753 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	GNA15	P30679	374 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	PTRHD1	Q6GMV3	140 aa	Known RBP	12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	TRIM65	Q6PJ69	517 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	LMBRD1	Q9NUN5	540 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	RGS12	O14924	1447 aa		12.84	□□□□□ -0.35
ABCA2-223	ENST00000614293	RNF103-CHMP3	A0A140T963	221 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	TTLL13P	A6NNM8	815 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	MAGEB2	O15479	319 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	EPB42	P16452	691 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	ST13	P50502	369 aa	Known RBP	12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	SV2C	Q496J9	727 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	TTC23	Q5W5X9	447 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	PPP1R18	Q6NYC8	613 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	FAM133A	Q8N9E0	248 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	COLEC11	Q9BWP8	271 aa		12.83	□□□□□ -0.35
ABCA2-223	ENST00000614293	WDR91	A4D1P6	747 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	TBC1D4	O60343	1298 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	PFKFB2	O60825	505 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	EGFR	P00533	1210 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CETP	P11597	493 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	GPSM2	P81274	684 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ADCK5	Q3MIX3	580 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	USP39	Q53GS9	565 aa	Known RBP	12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	PARVB	Q9HBI1	364 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	MAP3K4	Q9Y6R4	1608 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CHD1	O14646	1710 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CDK8	P49336	464 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	STIL	Q15468	1287 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	TIPIN	Q9BVW5	301 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	GPR63	Q9BZJ6	419 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	TMEM60	Q9H2L4	133 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	HERC5	Q9UII4	1024 aa	Known RBP	12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	PFAS	O15067	1338 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	USP19	O94966	1318 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	KCNQ4	P56696	695 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	IFT88	Q13099	833 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	DNAJC1	Q96KC8	554 aa	Known RBP	12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	VPS11	Q9H270	941 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	PTCH1	Q13635	1447 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ANGPT2	O15123	496 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	WBP4	O75554	376 aa	Known RBP	12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CYP2C19	P33261	490 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	IFNAR2	P48551	515 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	PLCL1	Q15111	1095 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	TMEM270	Q6UE05	265 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	THAP9	Q9H5L6	903 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	NSMCE4A	Q9NXX6	385 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	RWDD2A	Q9UIY3	292 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	PRR29	P0C7W0	189 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ADORA2B	P29275	332 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CAMKK1	Q8N5S9	505 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ZBTB7A	O95365	584 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	LCP1	P13796	627 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CPA1	P15085	419 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	SOAT1	P35610	550 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	TTLL9	Q3SXZ7	439 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	CATSPER3	Q86XQ3	398 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	XXYLT1	Q8NBI6	393 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	GLT1D1	Q96MS3	346 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	NUDT12	Q9BQG2	462 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	MYLK2	Q9H1R3	596 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ZFYVE1	Q9HBF4	777 aa		12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.83	□□□□□ -0.36
ABCA2-223	ENST00000614293	ABCC4	O15439	1325 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	RPS6KA5	O75582	802 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	ITGA4	P13612	1032 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	INPP5A	Q14642	412 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	C19orf60	Q96EN9	201 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	SAMD9L	Q8IVG5	1584 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	ALOX15	P16050	662 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	DGKD	Q16760	1214 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	CLEC4G	Q6UXB4	293 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	PROM2	Q8N271	834 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	SYT2	Q8N9I0	419 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	STK33	Q9BYT3	514 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	KRT84	Q9NSB2	600 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	PARVA	Q9NVD7	372 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	CLASP2	O75122	1294 aa	Known RBP	12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	CASP14	P31944	242 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	MOSPD2	Q8NHP6	518 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	SLC7A14	Q8TBB6	771 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	RNF146	Q9NTX7	359 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	CYP2E1	P05181	493 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	S100A5	P33763	92 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	AP2B1	P63010	937 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	C11orf88	Q6PI97	169 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	PIGS	Q96S52	555 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	EXO5	Q9H790	373 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	C3orf70	A6NLC5	250 aa	Predicted RBP	12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	DIAPH2	O60879	1101 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	SNAP25	P60880	206 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	CDH18	Q13634	790 aa		12.82	□□□□□ -0.36
ABCA2-223	ENST00000614293	MGAT5B	Q3V5L5	792 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms